Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq192 574 1e-161
>seq192
Length=8169
Score = 574 bits (636), Expect = 1e-161
Identities = 370/403 (92%), Gaps = 1/403 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1190
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1189 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 1130
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 1129 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 1070
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1069 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 1010
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| ||||||| ||||||||||| |||||| | ||||| |||||
Sbjct 1009 CAAGGCCATGCGATTCGAGAAGTTATCATGAATCACCAGAGAGCCCAG-AGGGCATTGGT 951
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 950 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 891
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403
||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 890 AATTACCACAGTTATCCAAGTAGTAAGGTACTATCAAATAAAC 848
Score = 156 bits (172), Expect = 1e-35
Identities = 96/101 (95%), Gaps = 1/101 (1%)
Strand=Plus/Minus
Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463
||||||| || ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 482 GATAACTTATATAATGAGCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACAT 424
Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||||||
Sbjct 423 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510358720768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |