Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq166 329 5e-88 seq97 134 2e-29 >seq166 Length=41542 Score = 329 bits (364), Expect = 5e-88 Identities = 246/281 (88%), Gaps = 8/281 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 40636 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 40693 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 40694 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 40753 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||| ||| |||| | ||| ||||||||||||||||||||||||| ||| ||||| ||| Sbjct 40754 GAAAGGGACGATTTCCCCCTACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAA 40813 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAG-CGCGGGG-CGCTCAGCTGGCGGATT 237 |||||||||| ||| || ||| | | |||| | ||||| || ||||| || ||| Sbjct 40814 CCTTAGCAGGTTGGCGACCGGCTCCGGGTAGAAGTCCCGGGGTCG---AGCTGACGAATT 40870 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||||| ||||| |||||||||||||||||||||||| Sbjct 40871 GCAATTTCACAATGCGTAGGGATAAATCCTTTGCAGACGAC 40911 >seq97 Length=265981 Score = 134 bits (148), Expect = 2e-29 Identities = 79/82 (96%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 46 GTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 105 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 143785 GTCAGACCGGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 143844 Query 106 TCAGAATCCATGCCAGAACGGG 127 |||||||||||||||||| ||| Sbjct 143845 TCAGAATCCATGCCAGAAAGGG 143866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198674688