Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10 136 6e-30 seq4 82.4 1e-13 >seq10 Length=415856 Score = 136 bits (150), Expect = 6e-30 Identities = 80/83 (96%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1 AATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAAT 60 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| |||||||||| Sbjct 61 CAAGAAAGAGCTCTCAATCTGTC 83 >seq4 Length=3495652 Score = 82.4 bits (90), Expect = 1e-13 Identities = 93/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Minus Query 140 GGCTATTTAGCAGGT----TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 || ||||||||| || || | ||| || | || | |||||| |||||| ||||| Sbjct 62900 GGTTATTTAGCAAGTAGAGTAGGCTCTTATTTGCTAATGCAATTAAGCAGACAGGTCACT 62841 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 || | |||||| | |||||| |||||||||||| ||||| | |||| || | ||||||| Sbjct 62840 CCCCTAACTAACAGTGGCCATACACCACCACCCACAGAATAAGGAAACAG-TCTCAATCT 62782 Query 256 GTC 258 ||| Sbjct 62781 GTC 62779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799868777