Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq10 499 9e-139 seq3 141 3e-31 >seq10 Length=415856 Score = 499 bits (552), Expect = 9e-139 Identities = 412/500 (82%), Gaps = 3/500 (1%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| ||||| |||| |||||| ||||||||||| ||| |||||||||| | |||||||| Sbjct 798 TACTTATTCCGATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 857 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||||| | ||||| |||||||||||||||| || |||||||| ||| | ||||| ||| Sbjct 858 CCCGTATTAGGATTAGGTAATTTGCGCGCCTACTACCTTCCTTAGATATAGTAGCTATTT 917 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||| |||| | |||| |||||| | ||||||||||||| |||||| || Sbjct 918 CTTAGGCTCCTTCTCTAGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGCGAG 977 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 | || | ||| ||||||||||| |||||| |||||||| ||| ||| ||||||||| Sbjct 978 GACAAGACCCTCGCATCGAAAGTTAATAGGGAAGAAATTTAAATAAACTATCGCCGGCGT 1037 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || ||||||| ||||||||| ||| || ||| |||||||||||||||| | | Sbjct 1038 AAGGCTATACGATTCGACTAGTTATTATAAATTACTAAGAAGCCCCGAAGGGCGTTAGCT 1097 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| |||||||||||| | ||||||| ||||| || ||||||| || ||||||||||||| Sbjct 1098 TTTAATCTAATAAATATATCCCTTCCAAAGTCAGGATTTTTAGTATATATTAGCTCTAGA 1157 Query 362 ATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||| ||||||||| | |||| || |||||| ||||||||||||||| || ||||| Sbjct 1158 ATTACTACGGTTATCTAAGTAGGTAAATATACTATTAAATAAACGATAACTTATATAATG 1217 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||| | ||||| ||| |||||||||||| || || ||||||||||| Sbjct 1218 AGCCATTCGCAGTTTCGCGGTATA-ATTACTTATACTTAGATATATATAGCTTAATCTTT 1276 Query 480 GAGACAAGCATATGACTACT 499 ||| ||| |||| |||||| Sbjct 1277 AAGATAAGTATATAACTACT 1296 >seq3 Length=5489246 Score = 141 bits (156), Expect = 3e-31 Identities = 91/100 (91%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 273 TCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGT 332 |||||||| |||||||||||||||||| || |||| ||||||||| |||||||||||| Sbjct 1646769 TCACCAAGAAGCCCCGAAGGGCGTTGGCTTCCAATCTCATAAATACATCCCTTCCGAAGT 1646710 Query 333 CGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGT 372 |||| |||||||||||||||||||||||||||||||||| Sbjct 1646709 CGGGAYTTTTAGCATGTATTAGCTCTAGAATTACCACGGT 1646670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399743232