Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq10 499 9e-139
seq3 141 3e-31
>seq10
Length=415856
Score = 499 bits (552), Expect = 9e-139
Identities = 412/500 (82%), Gaps = 3/500 (1%)
Strand=Plus/Plus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| ||||| |||| |||||| ||||||||||| ||| |||||||||| | ||||||||
Sbjct 798 TACTTATTCCGATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 857
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
||||| | ||||| |||||||||||||||| || |||||||| ||| | ||||| |||
Sbjct 858 CCCGTATTAGGATTAGGTAATTTGCGCGCCTACTACCTTCCTTAGATATAGTAGCTATTT 917
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||| |||| | |||| |||||| | ||||||||||||| |||||| ||
Sbjct 918 CTTAGGCTCCTTCTCTAGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGCGAG 977
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
| || | ||| ||||||||||| |||||| |||||||| ||| ||| |||||||||
Sbjct 978 GACAAGACCCTCGCATCGAAAGTTAATAGGGAAGAAATTTAAATAAACTATCGCCGGCGT 1037
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| || ||||||| ||||||||| ||| || ||| |||||||||||||||| | |
Sbjct 1038 AAGGCTATACGATTCGACTAGTTATTATAAATTACTAAGAAGCCCCGAAGGGCGTTAGCT 1097
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| |||||||||||| | ||||||| ||||| || ||||||| || |||||||||||||
Sbjct 1098 TTTAATCTAATAAATATATCCCTTCCAAAGTCAGGATTTTTAGTATATATTAGCTCTAGA 1157
Query 362 ATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
||||| ||||||||| | |||| || |||||| ||||||||||||||| || |||||
Sbjct 1158 ATTACTACGGTTATCTAAGTAGGTAAATATACTATTAAATAAACGATAACTTATATAATG 1217
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
|||||||||||||||| | ||||| ||| |||||||||||| || || |||||||||||
Sbjct 1218 AGCCATTCGCAGTTTCGCGGTATA-ATTACTTATACTTAGATATATATAGCTTAATCTTT 1276
Query 480 GAGACAAGCATATGACTACT 499
||| ||| |||| ||||||
Sbjct 1277 AAGATAAGTATATAACTACT 1296
>seq3
Length=5489246
Score = 141 bits (156), Expect = 3e-31
Identities = 91/100 (91%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 273 TCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGT 332
|||||||| |||||||||||||||||| || |||| ||||||||| ||||||||||||
Sbjct 1646769 TCACCAAGAAGCCCCGAAGGGCGTTGGCTTCCAATCTCATAAATACATCCCTTCCGAAGT 1646710
Query 333 CGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGT 372
|||| ||||||||||||||||||||||||||||||||||
Sbjct 1646709 CGGGAYTTTTAGCATGTATTAGCTCTAGAATTACCACGGT 1646670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399743232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |