Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq7 114 5e-20
seq1 86.0 3e-11
>seq7
Length=2136105
Score = 114 bits (126), Expect = 5e-20
Identities = 139/186 (75%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 349032 CGAGGTAGACCGACGCATTG--GGCTTCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTT 349089
|||||||||| ||| ||| | || |||| || || | | | || ||||||||||||
Sbjct 796905 CGAGGTAGAC-GAC-CATGGACGGTGTCTTGATGTTCGTTGCGAGGTTGAGAATCTCCTT 796848
Query 349090 GAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTG 349149
||| | |||| || || || |||||||| | || ||| |||||||| ||||| || |
Sbjct 796847 GAGACGCGGCACACCTAGCGTAACGTTCTTCGACGAGACACCGGCAAAATGGAACGTGTT 796788
Query 349150 GAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTC 349209
|| |||| ||| ||| |||||| |||||| ||||| |||| | | || ||||||||
Sbjct 796787 CAGCGTCATCTGAGTGGCGGGCTCACCGATGGACTGGGCCGCCAAAACACCCACCATCTC 796728
Query 349210 GCCGGG 349215
||||||
Sbjct 796727 GCCGGG 796722
>seq1
Length=7551078
Score = 86.0 bits (94), Expect = 3e-11
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774
|||| || || |||| ||| |||||||| || ||||| | ||||| |||||||| ||
Sbjct 4924062 AGATCCGCTCGAGGACGAGCTGGGCGATCCGGTCGCCCTCCTTGACCTCAAAGTCGCTGT 4924121
Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834
| | |||||||||||| | ||| ||||| ||| | || ||| | || || |
Sbjct 4924122 CGGCGTGGTTGAAGAGGAGAACCTTGACCTGGCCGCGGTAGTCGGCGTCAATCACACCCG 4924181
Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCC 21889
||||| ||||| ||||||| |||| || || || | ||| |||| |||||
Sbjct 4924182 CGCCGGTGTCGATGAAGTTCTTCGAGGCGAGGCCGGACCGGGGCGCGATTCGGCC 4924236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084738734842566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |