Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 2e-12 seq1 87.8 7e-12 >seq4 Length=3495652 Score = 89.7 bits (98), Expect = 2e-12 Identities = 111/147 (76%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||| || ||||| |||| | | ||||| || |||||||| || || ||||| | Sbjct 457478 CAATCGTCATTCGGGAGGGGATGGCGTGCGGGTTAATAATGATGTCCGGAACGATGCCCT 457419 Query 364485 CAGCG-GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 | ||| || |||||||| || || | || ||| | | || || || ||||||||| | Sbjct 457418 C-GCGCGTGAAGGGCATGTCCTCCTGCCGGTACG-TCACGCCGATCGTGCCCTTTTGCCC 457361 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||| || || |||||||||||||| Sbjct 457360 GTGGCGCGACGCGAACTTGTCGCCAAT 457334 >seq1 Length=7551078 Score = 87.8 bits (96), Expect = 7e-12 Identities = 170/247 (69%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 12800 CCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGTCTT- 12858 ||||| | ||| |||| |||||||||||||||| || | ||| | | | ||| Sbjct 3314716 CCATATGCCACT-TACCCAGGGTCTTTCCTCTAATCTCCCAGCAGT-TCGCGCTCACTTT 3314659 Query 12859 GTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAAT 12918 |||||| | || ||||| | || || | ||| |||| ||| |||| || | || Sbjct 3314658 GTTCCAGAACCCCTGGTGCATCTCCATGGACCGATCGCCAAGCTGGCGAGCCAGGGTGAT 3314599 Query 12919 TAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGAC 12978 || | | |||| |||||| |||||||| | | |||| |||||| || || ||||| Sbjct 3314598 TATCTCGGCGATGACGAGCTCCGCCACGCTCCGGGAGTTGGCAAAGGGCGAGTTGAAGAC 3314539 Query 12979 TGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCA 13038 |||||||| |||||| || ||| | || ||||| | |||||||||||||| Sbjct 3314538 GGCAATGCCCTGTTTGGCGGCATAGTCCACATCGACCTGGTTTGTGCCAATGCAGAAGCA 3314479 Query 13039 TCCTATG 13045 || ||| Sbjct 3314478 GCCGATG 3314472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885989448181