Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq4 89.7 2e-12
seq1 87.8 7e-12
>seq4
Length=3495652
Score = 89.7 bits (98), Expect = 2e-12
Identities = 111/147 (76%), Gaps = 4/147 (3%)
Strand=Plus/Minus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||| || ||||| |||| | | ||||| || |||||||| || || ||||| |
Sbjct 457478 CAATCGTCATTCGGGAGGGGATGGCGTGCGGGTTAATAATGATGTCCGGAACGATGCCCT 457419
Query 364485 CAGCG-GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542
| ||| || |||||||| || || | || ||| | | || || || ||||||||| |
Sbjct 457418 C-GCGCGTGAAGGGCATGTCCTCCTGCCGGTACG-TCACGCCGATCGTGCCCTTTTGCCC 457361
Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569
| ||| || || ||||||||||||||
Sbjct 457360 GTGGCGCGACGCGAACTTGTCGCCAAT 457334
>seq1
Length=7551078
Score = 87.8 bits (96), Expect = 7e-12
Identities = 170/247 (69%), Gaps = 3/247 (1%)
Strand=Plus/Minus
Query 12800 CCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGTCTT- 12858
||||| | ||| |||| |||||||||||||||| || | ||| | | | |||
Sbjct 3314716 CCATATGCCACT-TACCCAGGGTCTTTCCTCTAATCTCCCAGCAGT-TCGCGCTCACTTT 3314659
Query 12859 GTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAAT 12918
|||||| | || ||||| | || || | ||| |||| ||| |||| || | ||
Sbjct 3314658 GTTCCAGAACCCCTGGTGCATCTCCATGGACCGATCGCCAAGCTGGCGAGCCAGGGTGAT 3314599
Query 12919 TAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGAC 12978
|| | | |||| |||||| |||||||| | | |||| |||||| || || |||||
Sbjct 3314598 TATCTCGGCGATGACGAGCTCCGCCACGCTCCGGGAGTTGGCAAAGGGCGAGTTGAAGAC 3314539
Query 12979 TGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCA 13038
|||||||| |||||| || ||| | || ||||| | ||||||||||||||
Sbjct 3314538 GGCAATGCCCTGTTTGGCGGCATAGTCCACATCGACCTGGTTTGTGCCAATGCAGAAGCA 3314479
Query 13039 TCCTATG 13045
|| |||
Sbjct 3314478 GCCGATG 3314472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884885989448181
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |