Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq29 349 6e-94 seq16 315 1e-83 >seq29 Length=65974 Score = 349 bits (386), Expect = 6e-94 Identities = 201/206 (98%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 83 TACTAAGCGGAATTACCATTGGGGCAATCATCATCAGTAGGGTAAAACTAACCTGTCTCA 142 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 143 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 202 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 203 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 262 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||| Sbjct 263 GAACGCTTGGCTGCCACAAGCCAGTT 288 >seq16 Length=977426 Score = 315 bits (348), Expect = 1e-83 Identities = 192/204 (94%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 573495 TACTAAGCGGAATTACCATTGGGGTAATCATCATCAGTAGGGTAAAACTAACCTGTCTCA 573436 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 573435 CGACGGTCTAAACCCAACTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 573376 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 || | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 573375 ATCTTTCTTCGGTATGATAGGAAGAGCCGACATCGAAAGATCAAAAAGCAACGTCGCTAT 573316 Query 181 GAACGCTTGGCTGCCACAAGCCAG 204 |||| ||||||||||||||||||| Sbjct 573315 GAACTCTTGGCTGCCACAAGCCAG 573292 Score = 138 bits (152), Expect = 2e-30 Identities = 84/89 (94%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||| |||||||||| ||||| ||||||| |||||||||| |||||||||||||||||||| Sbjct 572011 ATCTCTGTGGTAACCTTTCTAGCACCTCCAGCCTCAAATGTCGAGGGACTAAAGGATCGA 571952 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 571951 TAGGCCACACTTTCATGGTTTGTATTCAC 571923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399572800