Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq29 796 0.0 seq4 293 7e-77 >seq29 Length=65974 Score = 796 bits (882), Expect = 0.0 Identities = 481/505 (95%), Gaps = 2/505 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2161 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTATATCAGTATTTATTGTCACTACCT 2220 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2221 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2280 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2281 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 2340 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| || | ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2341 AGCCAATACCTTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCGTCGCCGGCG 2400 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCC-GAAGGGCGTTGG 299 |||||||||||||| ||||| ||||| |||||||||||| ||||||| |||||| |||| Sbjct 2401 CAAGGCCATGCGATCCGTTAGGTTATCATGAATCACCAAAGAGCCCCAAAAGGGCATTGG 2460 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 |||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| Sbjct 2461 TTTTTTATCTAATAAACACACCCCTTCTGAAGTCAGGGTTTTTAGCATGTATTAGCTCTA 2520 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||| | |||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 2521 GAATTACCACAGCTATCCAAGTGGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 2580 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 2581 AGCCATTCGCAGTTTCACGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTT 2639 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 2640 GAGACAAGCATATGACTACTGGCAG 2664 >seq4 Length=3241893 Score = 293 bits (324), Expect = 7e-77 Identities = 170/175 (97%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 11 CAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCG 70 |||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1479309 CAATCACAGGACCCAAAAGAGCCCTATATCAGTATTTATTGTCACTACCTCCCCGTGTCG 1479368 Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1479369 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 1479428 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 1479429 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTAAGCCA 1479483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399244800