Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq4 237 1e-57
seq1 159 3e-34
>seq4
Length=3241893
Score = 237 bits (262), Expect = 1e-57
Identities = 464/681 (68%), Gaps = 6/681 (1%)
Strand=Plus/Plus
Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322
||||| | || || | |||| ||||| | || || ||||| || | ||| || ||
Sbjct 827252 TCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGGCACATGAGTGTCCACTCGCCG 827311
Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382
| || | || || ||| || || || || ||||| | ||||| || | || ||
Sbjct 827312 TTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAATAAGTCACGA 827371
Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442
|| || || || |||| ||||| || || | ||| ||||| | || | ||||||
Sbjct 827372 GCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAAACGTCGGCG 827431
Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502
|||||||| |||||||||||||| |||| || |||||| ||| ||||| || ||
Sbjct 827432 TGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGCCTTGATCAACA 827491
Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562
|| | |||| ||||||| ||||||| | ||| || | ||| ||||| || |||||||
Sbjct 827492 TACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGACGTGCCATTT 827551
Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622
|| || | ||| || || || || || ||| ||||||||||||||||| ||
Sbjct 827552 GTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCAATACCGCCT 827611
Query 66623 GCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGT 66680
|| || || ||||| || || || | || ||| | ||||| || ||| ||
Sbjct 827612 GCGGTTTTGGAGATCATGGCGCA--CGTCTTCAGTGTGTCATAGATGCCCTCGATGCTGT 827669
Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740
| |||| || | |||| |||| || | |||||| || || | || ||
Sbjct 827670 CCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGGCGATGGGGTCCCCGCATTGA 827729
Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800
||||||| || | |||||| || ||||| | || |||||||||||||| ||||| ||
Sbjct 827730 AGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCTCGACATGTAATTGTATGTCTCAATTG 827789
Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGA-GTGCACATCGCATCAGGAGGTATTGAGGC 66859
| ||| |||| ||||||||| || |||| | |||| |||||||| | || ||| ||
Sbjct 827790 CCTTATCGATGTCTTCGCCATGTATGCCGACGGACACA-CGCATCAGCATGTGTTGTGGA 827848
Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919
|| ||| | | || || || | | | ||| |||||||| || ||||||| |||
Sbjct 827849 CGCTCGGCAATTTTGTCGTTTATGCGGAGGAGGTATGAGCGTTCAAGAGTCTTGAAACCG 827908
Query 66920 AAGTACGAGTAATTGAAATCG 66940
||| || ||| ||||| |||
Sbjct 827909 AAGAACTGGTAGTTGAAGTCG 827929
Score = 140 bits (154), Expect = 3e-28
Identities = 152/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050
||||| || |||| || || | ||||||||| ||||| || || | ||| ||||||| ||
Sbjct 826931 CCACATACATGGGCAGAGCTAAAGATGCGAGATTGCACACTGCGACCTCCTCAGGAGAGG 826990
Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110
| |||| || || || ||||| || || || ||| || || |||| ||||| || |
Sbjct 826991 TGTACTGGATGATCTCTGTGCAAAGGTTGGAGCTGCGGATCGTTCCCAGATTCTTCTGGT 827050
Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170
| |||||||||||||| ||||| ||||||| |||||| || | || ||||| ||| |
Sbjct 827051 TGCTCTTGCGATTGCAAGCATCTTTGTACAGCATGTATGGGTTTCCAGTCTCGGTTTGAG 827110
Query 66171 ACTCAATGATGGCGTGCCAAAG 66192
||| | |||||| | ||||||
Sbjct 827111 CCTCGAGGATGGCATACCAAAG 827132
Score = 138 bits (152), Expect = 9e-28
Identities = 317/469 (68%), Gaps = 10/469 (2%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||| | | || ||||||| | || | ||| ||||||||||| |||
Sbjct 826036 TCGACAGTGAACTGGATGGGAGCAGAAGCCGCCATCGTTCGAAGGTAGTACATGCCCGTC 826095
Query 65138 TTGAGGCC-AGCA--CGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGG 65193
||||| || ||| | || |||| || ||||| || | | || |||| | | ||
Sbjct 826096 TTGAGACCGAGCTTCCACCCAGCAAAG---TGCATAGAGG-TGATCTTGCCCATGGTAGG 826151
Query 65194 CTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGC 65253
|| || || ||||| | |||||| ||| |||||| | ||||||||||||||
Sbjct 826152 TTCCTTCATGTGGATATTGAGAGACTGAGACTGGTCGATGAAGGCGCCACGATCTGCAGC 826211
Query 65254 CATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GCGACGTACCT 65312
||| | | |||| | | || || ||||| || |||||||| || || | | |
Sbjct 826212 CATCTGCAGGATATGTCTCTGTGAGATTTCCCACACAGTCTTGTAGAGTGCTTTG-ATAT 826270
Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372
|| || || | || ||| | || |||| || || || | ||| ||
Sbjct 826271 CATCGGGGATGTTGGGGATCCGCTGAATAGAGCCACCTTCGGCGATGATCCTATTCTTCA 826330
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432
| || |||||||| |||| |||| ||||| || | ||| |||||| || |
Sbjct 826331 TGTTGTCGGACCACAAGCCCATGTCGACAAGATCTTTGAGCAACCAGGGATTGACGATCT 826390
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
|||||||||| | || ||||| ||| ||||||||||| || || |||||| |||
Sbjct 826391 GGAACTCGCCAGCGAGAACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCAAAGCATT 826450
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGAC 65541
| |||| || ||||| || | ||||| ||||| ||||| ||||| ||
Sbjct 826451 CGTTGTTACCGAGAATCTGAGATGTAGAGGCAGTCGGCATAGGAGCCAC 826499
>seq1
Length=5232100
Score = 159 bits (176), Expect = 3e-34
Identities = 236/329 (72%), Gaps = 9/329 (3%)
Strand=Plus/Minus
Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149
|||| |||||||| ||||| ||||||||||||||||| | || ||| ||||| | |||
Sbjct 3073933 TGGCAAATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAAGAGATCGATCTCTCC 3073874
Query 61150 AAAGACATGAATGACTGG-----GAGCGTTTATCGAGCGGTGAACAACATTTCATTAAAC 61204
|||||| | | |||||| ||| | || || || ||| | |||||| ||
Sbjct 3073873 AAAGACCTTCACGACTGGAACAAGAGGCTCAAT-GA-CGATGAGCGCTTCTTCATTTCAC 3073816
Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-T 61263
| || | || ||||| ||||| || ||||| |||||||| |||||| | | || || |
Sbjct 3073815 ACGTCCTCGCCTTCTTCGCCGCATCCGACGGCATCGTCAACGAGAATCTGGTCGAGCGCT 3073756
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
|| ||| | |||| ||| | | |||||||| || ||||| ||||||||||| |||
Sbjct 3073755 TTAGCGGCG-AGGTACAAATACCAGAGGCGCGATGCTTCTATGGCTTCCAGATCATGATG 3073697
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
||||| |||||||||||| |||| | | ||||| || |||||||| |||| |
Sbjct 3073696 GAGAACATCCACTCGGAGACGTACTCGCTGTTGATCGACACATACATCAGCGAGCCCAAG 3073637
Query 61384 GAACGTGAACGATTGTTCAATGCCATCGA 61412
|||| | ||||||||||||| ||
Sbjct 3073636 CAACGCACATATCTGTTCAATGCCATTGA 3073608
Score = 96.9 bits (106), Expect = 3e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | ||||||||| | || ||||||||||| || || | ||||| ||| |
Sbjct 3073469 GCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGGATCCTTCGCGTCCATCTTCTGGCTC 3073410
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| || || || |||||||| ||||||||| ||||| | || || || || |||
Sbjct 3073409 AAGAAGCGCGGTCTCATGCCCGGCCTGACCTTCTCGAATGAACTCATCTCTCGTGATGAG 3073350
Query 61618 GGCATGCA 61625
||||||||
Sbjct 3073349 GGCATGCA 3073342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567757732000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |