Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1136 428 8e-118 >seq1136 Length=7535 Score = 428 bits (474), Expect = 8e-118 Identities = 283/312 (91%), Gaps = 1/312 (0%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66 ||||||||||||||| ||||||| || || ||||||||| |||||| ||| ||||| Sbjct 2129 GTCCGGCCGGGCCTT-CCTTCTGAAGAACCTCATGCCCTTTACTGGGCGTGTTGGGGAAT 2187 Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2188 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACGTTA 2247 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 ||||||||||||| |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 2248 GCATGGAATAATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACGCCGCAA 2307 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||| ||| | ||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 2308 TGATTAACAGGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGAT 2367 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 2368 TTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGAAC 2427 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 2428 GAAAGTTAGGGG 2439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915184990720