Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq358 82.4 2e-13 >seq358 Length=1373 Score = 82.4 bits (90), Expect = 2e-13 Identities = 259/391 (66%), Gaps = 48/391 (12%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64 |||||||| | ||| || |||||| ||| | || ||||||||| ||| |||| Sbjct 396 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 451 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 | | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| | Sbjct 452 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 511 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GC---TTCGATTGCTC 176 |||| || ||||||| || | ||||| || |||| || || || | | || Sbjct 512 CATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGCCTATTTTAGTCGTC 570 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233 ||| | || |||||| ||| || |||||| ||| || || |||||||| | | Sbjct 571 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATT 627 Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCC-------TAT-T 284 | | |||| ||| | ||||||||| |||||||||| || | ||| | Sbjct 628 TACATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG--TGCAACACCATTTTATGT 685 Query 285 CTCTGCGGCCT---GTCATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGG 330 ||| | ||| | ||| || ||||| |||||||||| |||||||| Sbjct 686 CTCCTCTTCCTAAACTGATATTAATCAGTAGGAATGGCACACCTTCTCCCTCAGTTACGG 745 Query 331 GGTCATTTTGCCGAGTTCCTTAACAATAGTT 361 |||| ||||||||||||||||| || ||| Sbjct 746 TGTCAATTTGCCGAGTTCCTTAATGATTGTT 776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062382576640