Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq50 425 4e-114 seq1363 132 4e-26 >seq50 Length=66349 Score = 425 bits (470), Expect = 4e-114 Identities = 1243/1883 (66%), Gaps = 60/1883 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| || | | || || ||| |||| | || ||||||||||||||| Sbjct 65485 TCGACAGTGAACTGAATTGGAGCAGAGGCGGCCATGGTGCGGAGGTAGTACATGCCGGTC 65426 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGGCT 65195 ||||| ||| ||| | || |||||||| | | || |||| || || |||| Sbjct 65425 TTGAGACCAAGCTTCCATCCGGCAAAGTGCATCGAGG-TGATCTTGCCCATGGTT-GGCT 65368 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| |||||| |||||| ||| || |||||| || ||||||| Sbjct 65367 CCTTCATGTGAATGTTCAGCGACTGTGACTGATCAATGAAAGCACCACGGTCAGCAGCCA 65308 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTA----CC 65311 | | |||||| || ||| || ||||| ||||||||||| || || | | || Sbjct 65307 TCTGAATGATGGTTCGCTGCGAGATTTCCCAAACGGTCTTGTAGAG-CGTCTTGGTCTCC 65249 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTG-AACCACGACGTGCAATAATGCGATTACG 65370 ||| || || | || || || | || |||||| ||||||||||| || Sbjct 65248 TCA---GGGATGTTGGGGAT-TCTTGCAATGGAACCACCCTCGGCAATAATGCGGTTCTT 65193 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATG 65428 ||| ||| ||||||| |||| |||| |||| |||| | || | | |||| Sbjct 65192 CATGTTCTCAGACCACAGGCCCATGTCGACGAGATCCTTGAGC--AGCCATGGGTTGACA 65135 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || |||||||| || | || ||||| || |||||||| || ||| || || ||| Sbjct 65134 ACCTGGAACTCACCCGCGAGCACACGTCGAGAGTAGATGTTAGATGTGTACGGCTCGAAG 65075 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 |||| |||| || ||||| |||| || || ||||||||||||||||||| |||||| Sbjct 65074 CATTCGTTGTTTCCGAGAATCTGGGAGGTCGAGGCAGTTGGCATGGGAGCGATCAACAAA 65015 Query 65549 GAGTTTCGCAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCG 65606 ||||| || | || ||| | |||| ||| ||| || |||||| ||| | | Sbjct 65014 GAGTTGCGTACACCATGTTGAG--CAATCTTGGCCTTCAACTCTGCCCAGTCCCAGA--G 64959 Query 65607 GTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTG 65666 || | | | | || ||||||||| | || |||||||| | | || | Sbjct 64958 GTCGGTGGGGGTGA----CGTTCCACATATCGTACTGAAGGGTTCCCTGAGAAACGGGAG 64903 Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTG 65726 | || | | | || || || ||||||||||| | ||| | || | Sbjct 64902 ATCCCTCGTAGGTCTCATATGGACCAAGCTCCTTGGCAATGTCGCAGGAAGAAGTAAGAG 64843 Query 65727 CGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCGCTCTCG 65785 | || || ||||||||||| || | || || ||| | ||||| | |||| Sbjct 64842 CAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GCCTCTGCCGACTCG 64784 Query 65786 TACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 | |||| | || || |||| |||||||||||||| || || |||||||| || Sbjct 64783 AAAGGCAGGCGCAATGCGAGGAAAGCATCGGCCAGACCTTGTACGCCCATACCGATAGGT 64724 Query 65846 CGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 || ||||| || ||| || | ||||| || ||||||| |||| || || || Sbjct 64723 CGGTGACGGAAGTTGCTGCGGCGTGCCTCCTCAACGGGGTAGTGGTTGACTTCAATGATC 64664 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAATCAAAAT 65963 ||||| ||||| || || || || || | ||| | ||| ||| ||||| | Sbjct 64663 TTGTTCAAGTTGCGGGTGACAACCTGGGTGA--CCTCGTGAAGCTTCTGGAAGTCAAACT 64606 Query 65964 GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 | || | | ||| | ||||| ||| ||||||||||| || || | Sbjct 64605 CGCCA---CGCTTGT-AGT--------CAACAAAAGAGGGCAGGGCAAGAGAAGCAAGAT 64558 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 |||| ||||| | ||| ||||| || || ||||||||||| || |||||||| || || Sbjct 64557 TGCAAACAGCAACCTCATCAGGGGCAGTGTACTCGACAATCTCCGTGCACAGGTTGGAGC 64498 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 || || |||||||| |||| || || ||||| || ||||| ||||||||||| | || Sbjct 64497 TACGGATAGTGCCCAAGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAGAGCA 64438 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 | | || | || || || |||| || | |||||||| ||| || | || Sbjct 64437 TAAAGGGGTTACCAGTTTCGGTCTGGGCTTCGAGGATGGCGTACCACAGCTTCTGGGCGC 64378 Query 66204 TCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262 || || || ||||| | ||| | ||||| ||||| || || || Sbjct 64377 GGACAGTTTC-ACGGCCCTTGTTCTGCTTCTCGTAGCTCTCGTACAGAGCCTCAAACTCA 64319 Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322 ||||| | || || | || | || |||| || || ||||| || | ||| || || Sbjct 64318 TCACCGTAGACGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGAGTCCACTCCCCG 64259 Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 | || | ||||| ||| || ||||| || ||||| || |||||||| ||||| || Sbjct 64258 TTCTCCTGGACACGCTTCATGAACAGATCGGGGATCCACAGAGCGTAGAACAGATCACGG 64199 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 || || |||||| ||||||| || ||||| | || ||||| |||||| ||||| Sbjct 64198 GCGCGAACCTCCTCTTTGCCGTGGTTCTTGCGGAGATCAAGGAAGCCAAAGACATCGGCG 64139 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502 |||||||| || ||||| ||||| || | || || ||| |||||| ||||||||| Sbjct 64138 TGCCATGGCTCAAGGTAAATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCGACG 64079 Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562 |||||||| |||||| | ||||| | ||| || | ||| ||||| ||| | || ||| Sbjct 64078 TAGCGAGCAGTGTTGTTGTACACACGGAGCATAGGAATGAGACCGTTTGATGTTCCGTTG 64019 Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622 ||||| | ||| || || || || || ||| || || ||||||||||| || Sbjct 64018 GTGCCACCAATGTATGAGCCAGTAGCACGAATTCGGTGGACGTTGAGACCAATACCGCCA 63959 Query 66623 GCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAATGGAG 66679 || ||||| ||||| ||||| || | | ||| | | || ||||||||| | Sbjct 63958 GCGGTCTTGGAGATCAAGGCACA---GGTCTTGAGTGTATCGTAGATACCGTCAATGCTG 63902 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| || | |||| |||||||| | || || ||| ||| | || | Sbjct 63901 TCCTCCTTCATATCGATGAGGAAGCATGAAGACATCTGAGGCGAGGGAGTGCCTGCATTG 63842 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || || || |||| ||||| || ||||| | | |||||||| | || ||||| ||| Sbjct 63841 AACAGTGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAGTCATAGGTCTCAATG 63782 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGG 66858 | ||||||| ||||| ||||| || | || ||| ||||| || | || ||| || Sbjct 63781 GCCTTCTCAATGTCCTCGCCGTGAATACCAACAGCGACA-CGCATGAGCATGTGTTGCGG 63723 Query 66859 CCGTTCGACCAGCCGATCCTTGATATGC--ATTAAGTAGGAGCGTTCCAGGGTCTTGATA 66916 || || | || || || | ||||| | | ||| || || || || ||||||| Sbjct 63722 ACGCTC-AGCAACCTTGCCAT-CTATGCGGAGGAGGTATGAACGCTCAAGCGTCTTGAAG 63665 Query 66917 CCAAAGTACGAGTAATTGAAATC 66939 |||||| | ||| ||||| || Sbjct 63664 CCAAAGAATTGGTAGTTGAAGTC 63642 >seq1363 Length=52244 Score = 132 bits (146), Expect = 4e-26 Identities = 291/434 (67%), Gaps = 3/434 (1%) Strand=Plus/Plus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 ||||| || | ||||||||| | || ||||||||||| ||||| | ||||| ||| | Sbjct 38455 GCATTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGATCATTTGCATCCATCTTCTGGCTC 38514 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| ||||| || ||| ||| ||| | || || || |||||| Sbjct 38515 AAGAAGCGTGGTCTGATGCCTGGTCTTACTTTCTCCAACGAGCTCATCTCTCGTGACGAG 38574 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 |||||||| || || || |||| ||| | || ||| | || || Sbjct 38575 GGCATGCACACCGACTTCGCCTGCCTGCTCTTC--TCTCT-TCTCAACACCCGCCCCAGC 38631 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 ||||| ||| | || | ||||| || | || || || || || || | Sbjct 38632 AAGGAGTCTGTCCAGGCCATCATCACCGAGGCTGTTGCCATTGAGCAAGAGTTCCTTAGC 38691 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||||| |||| | | | |||||||||| || |||| ||||| ||||| Sbjct 38692 GACGCCCTGCCATGCGCTTTGCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAG 38751 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || ||||| ||||||||| | ||| | |||| | | | |||| | | | ||| Sbjct 38752 TTCGTTGCTGACCGTCTGCTTCTCGCTCTGGGCAACACCAAGGTCTACCACGCCACGAAC 38811 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||| | || ||||| | ||||||||| || || |||||||| ||| Sbjct 38812 CCCTTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGT 38871 Query 61918 GTAGGCGACTATCA 61931 || || ||||| || Sbjct 38872 GTCGGTGACTACCA 38885 Score = 127 bits (140), Expect = 2e-24 Identities = 206/293 (70%), Gaps = 5/293 (2%) Strand=Plus/Plus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| ||||| || ||||| |||||||| | || || ||||| | ||| Sbjct 37996 TGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCTGAAGAAATCGATCTCTCC 38055 Query 61150 AAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACA 61205 || || | | |||||| | |||| | | || || |||| ||||| || Sbjct 38056 AAGGATCTCCACGACTGGAACAAGCGTCTCAATGA-CGACGAACGCTTCTTCATCTCCCA 38114 Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265 || | || ||||| || || || || || |||||||| ||||| | | || ||||| Sbjct 38115 CGTCCTCGCCTTCTTCGCAGCCTCCGATGGCATCGTCAACGAGAACCTGGTCGAGCGTTT 38174 Query 61266 CGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGA 61325 | || || || ||| | | ||||| || || ||||||||||||||||| ||||| Sbjct 38175 CTCGAGCGAAGTACAAATCCCTGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGA 38234 Query 61326 GAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 |||||||||||| |||| ||| | |||||||| || ||||| || |||| Sbjct 38235 GAATGTCCACTCTGAGACCTACTCCCTGCTCATCGACACATACATTAGCGAGC 38287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397560053609600