Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3144 343 2e-92 seq3867 105 1e-20 >seq3144 Length=1080 Score = 343 bits (380), Expect = 2e-92 Identities = 234/259 (90%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 768 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 827 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 828 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 886 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | | ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 887 GGCCCGCAAACG-CGAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 945 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct 946 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAG 1005 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1006 AAAGAGCTCTCAATCTGTC 1024 >seq3867 Length=10830 Score = 105 bits (116), Expect = 1e-20 Identities = 66/71 (93%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct 10009 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGAAAGAGCT 10068 Query 248 ATCAATCTGTC 258 |||||||||| Sbjct 10069 CTCAATCTGTC 10079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796770142908