Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq705 304 2e-80 >seq705 Length=6926 Score = 304 bits (336), Expect = 2e-80 Identities = 242/282 (86%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 3224 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 3281 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 3282 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 3341 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| | || |||| ||||||| |||||||||||||| || ||||| || Sbjct 3342 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCCAGA 3401 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GA-AGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| ||||||||||| || || |||| | | || | | |||||| |||| ||||||| Sbjct 3402 ACCTCAGCAGGCCGGCGAC-GGTGTCCGGGGAGAGACCCTCGGGCGC-CAGCCGGCGGAT 3459 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||||| |||| |||||| ||||| |||||||||| Sbjct 3460 TGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGAC 3501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819169303552