Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq437 104 3e-20
>seq437
Length=7320
Score = 104 bits (114), Expect = 3e-20
Identities = 161/228 (71%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT-CGCAC 60
||| || ||||||| ||||||| || || | ||||| |||| || || |||| ||||
Sbjct 5007 TTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGCCATCTTACGCAA 4948
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||| | |||||||||| | | ||||| ||| || | | | |
Sbjct 4947 AGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCTCTTCTA----A 4892
Query 121 ACACGTCGTTCACCAGC---AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
|| | || | ||| | |||||| |||| ||||| |||||||| | || ||||||
Sbjct 4891 ACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCGCAGTTACGGAGTCAATTTGCC 4832
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTG 225
|| |||||||| | ||| | | |||||||| ||||||||||| ||
Sbjct 4831 GAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTACTTG 4784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694392371582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |