Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq437 104 3e-20 >seq437 Length=7320 Score = 104 bits (114), Expect = 3e-20 Identities = 161/228 (71%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT-CGCAC 60 ||| || ||||||| ||||||| || || | ||||| |||| || || |||| |||| Sbjct 5007 TTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGCCATCTTACGCAA 4948 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||| | |||||||||| | | ||||| ||| || | | | | Sbjct 4947 AGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCTCTTCTA----A 4892 Query 121 ACACGTCGTTCACCAGC---AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || | || | ||| | |||||| |||| ||||| |||||||| | || |||||| Sbjct 4891 ACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCGCAGTTACGGAGTCAATTTGCC 4832 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTG 225 || |||||||| | ||| | | |||||||| ||||||||||| || Sbjct 4831 GAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTACTTG 4784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694392371582