Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq437 120 8e-25 >seq437 Length=7320 Score = 120 bits (132), Expect = 8e-25 Identities = 194/276 (70%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| || ||||||||||||||||| | | |||||||| |||||| Sbjct 5197 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTT 5138 Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 5137 TTATCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 5078 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTTAGCTA 184 || | || ||||||| || | |||| ||| |||| | | || || ||||| Sbjct 5077 ATAGATAAGGCCGCCATTGAATGGGGGTTCCTTCAAAACCTAGCCTATTTTAGTCAGCTA 5018 Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCG 243 | || |||||| ||| || ||||||| || ||||| ||||| || | || | Sbjct 5017 AATAAATTCGTTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGCCA 4958 Query 244 TGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || ||| ||||||||||||| | |||||||||| Sbjct 4957 TCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG 4922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260785702528