Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq437 120 8e-25
>seq437
Length=7320
Score = 120 bits (132), Expect = 8e-25
Identities = 194/276 (70%), Gaps = 10/276 (4%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||| || ||||||||||||||||| | | |||||||| ||||||
Sbjct 5197 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTT 5138
Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131
||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| ||
Sbjct 5137 TTATCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 5078
Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTTAGCTA 184
|| | || ||||||| || | |||| ||| |||| | | || || |||||
Sbjct 5077 ATAGATAAGGCCGCCATTGAATGGGGGTTCCTTCAAAACCTAGCCTATTTTAGTCAGCTA 5018
Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCG 243
| || |||||| ||| || ||||||| || ||||| ||||| || | || |
Sbjct 5017 AATAAATTCGTTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGCCA 4958
Query 244 TGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| || ||| ||||||||||||| | ||||||||||
Sbjct 4957 TCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG 4922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260785702528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |