Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq437 95.1 3e-17 >seq437 Length=7320 Score = 95.1 bits (104), Expect = 3e-17 Identities = 255/386 (66%), Gaps = 32/386 (8%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | ||| ||||||||| ||| | || ||||||||| |||||| Sbjct 5197 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTT 5138 Query 67 ACGCCTTTCGTGCGG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 125 | ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 5137 TTATCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 5078 Query 126 ATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GC---TTCGATTGCTCT 177 |||| || ||||||| || | ||||| || |||| || || || | | || Sbjct 5077 ATAGATAAGGCCGCCATTGAATGGGGGTT-CCTTCAAAACCTAGCCTATTTTAGTCAGCT 5019 Query 178 AACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCG 237 || | | |||||| |||| || ||||||| || || ||||| ||| |||| Sbjct 5018 AAATAAATTCGTTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGCC 4959 Query 238 A-CTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295 | |||| ||| | ||||||||| |||||||||| | ||||| ||| ||| Sbjct 4958 ATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCT 4899 Query 296 ------------------GTCA--TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCA 335 ||| |||| ||||| |||| |||| |||||||| |||| Sbjct 4898 CTTCTAAACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCGCAGTTACGGAGTCA 4839 Query 336 TTTTGCCGAGTTCCTTAACAATAGTT 361 ||||||||||||||||| || ||| Sbjct 4838 ATTTGCCGAGTTCCTTAATGATTGTT 4813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062387952384