Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq12 268 7e-67 seq95 158 1e-33 >seq12 Length=708323 Score = 268 bits (296), Expect = 7e-67 Identities = 514/755 (68%), Gaps = 6/755 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||| | ||||| || || ||||| |||||||||||||| | ||| ||||| || || Sbjct 539384 ACAAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTG 539325 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||||||| ||| ||| || || || ||| |||||||| | |||| || || Sbjct 539324 TACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTG 539265 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||||||| ||||| |||||||||| |||| | || |||| ||||| || || | | Sbjct 539264 CTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCC 539205 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT---ACGTACCGCCCTACCTTTG 66229 |||| ||||||| ||| || | || || || ||| ||| || ||| | Sbjct 539204 TCAAGAATGGCGTACCAGAGCTTCTGGGCACGAACGGTCTCACG-ACC--CCGACCCTCC 539148 Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 ||||| || ||||| || ||||| || || | || |||| |||| || Sbjct 539147 TTCTCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGG 539088 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 |||| || || |||||||| | ||| || | |||||| ||||| ||| || ||| Sbjct 539087 CACTCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGACACGCTTCATGAAGAGA 539028 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409 || || ||||| || ||||| || || || || || || ||| || | ||||| || Sbjct 539027 TCGGGGATCCACAGAGCGTAAAACAGGTCACGAGCGCGAACCTCTTCCTTTCCGTGGTTC 538968 Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469 ||||| | ||| ||||| |||| ||||||||||| || || ||||| |||||||| Sbjct 538967 TTGCGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGAAT 538908 Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529 | || ||| ||| |||||| |||||||| ||||| ||| |||||| | ||||| Sbjct 538907 GCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACACGG 538848 Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589 | ||| || | ||| ||||| | || |||||||| | || | || || Sbjct 538847 AGCATAGGAATGAGGCCGTTGCTGGTACCGTTGGTGCCAGCAATATAGCTGCCAGTAGCG 538788 Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCG 66649 || ||| ||| ||||| || || ||||||||||| ||||| || || || || Sbjct 538787 CGAATACGGTGGACATTGAGGCCGATACCACCGGCGGTCTTGGAAATCATGGCGCAGGTC 538728 Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709 || || | | || || |||||| ||| |||| ||| | |||| |||| ||| Sbjct 538727 TTCAGGGTATCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAA 538668 Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744 || || || ||||| || |||| |||||| Sbjct 538667 GCCAGCTGAGGCTTGGGAGTACCGGCGTTGAAGAG 538633 Score = 120 bits (132), Expect = 2e-22 Identities = 328/494 (66%), Gaps = 14/494 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | | ||| || |||| ||| | |||||||||||||| ||| Sbjct 540281 TCGACAGTGAACTGGATGGGAGCAGCGGCAGCCTGGGTACGGAGATAGTACATGCCAGTC 540222 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195 ||||| || ||| |||| | ||| ||||| || | | || |||| | | || | Sbjct 540221 TTGAGACCGAGC-TTCCAACCGGCGAAGTGCATGGA-GGTGATCTTGCCCATCGTAGGAT 540164 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | ||||| |||||||||| | |||||| || ||||||| Sbjct 540163 CCTTCATGTGAATGTTGAGGGACTGCGACTGATCGATGAAGGCACCACGGTCAGCAGCCA 540104 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | ||| ||| || | |||||||||||||||||| | ||| | | | ||| Sbjct 540103 TCTGGACGATGGTACGCTGAGAGAGCTCCCAGACGGTCTTGTAGA-GCGCCTTGATGTCA 540045 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || | ||| | ||||| || || ||||| ||||| || |||| Sbjct 540044 TCCGGGATGTTGGGAATTTGCTGGATGGAGCCGTTGGAAGCAATGATGCGGTTCTTCATC 539985 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430 || ||||||| ||| | |||| || | | || ||| | | |||| ||| Sbjct 539984 TGGTCCGACCACAGACCGAGGTCGACCAGGTCCTTCAGGAGCCAGG----GGTTGACGAC 539929 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||||| |||| || ||||| || || ||||| || ||| || || ||| | Sbjct 539928 CTGGAACTCACCGGCCAAGACACGGCGAGAGTAAATGTTCGAAGTGTAAGGCTCGAAGCA 539869 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || || ||| ||||| || ||||| ||||| |||||||| || || | || || Sbjct 539868 CTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAACGAGCAGGGA 539809 Query 65551 GTTTCGCAATCCGT 65564 ||| || | |||| Sbjct 539808 GTTGCGGACACCGT 539795 >seq95 Length=147769 Score = 158 bits (174), Expect = 1e-33 Identities = 299/435 (69%), Gaps = 5/435 (1%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||||| ||||||||| | || ||||||||||| || || | ||||| ||| || Sbjct 14549 GCTTTTGCGGCTGTCGAGGGTATCTTCTTCAGTGGATCCTTCGCTTCCATCTTCTGGCTG 14490 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| || ||| || ||| | || || || |||||| Sbjct 14489 AAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAACGAGCTCATCTCTCGTGACGAG 14430 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTC 61676 || |||||| || || ||| |||| ||| | | ||| || ||| | || | Sbjct 14429 GGTATGCATACCGACTTCGCTTGCCTGCTGTTCTCGCAC-ATCAAGTCGAA--GCCCAGC 14373 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 | || || | |||| | ||||| ||| |||||| |||| || || || Sbjct 14372 CCCGATGC-CGTCGAGAAGATCATCACCGAGGCCGTAGATATCGAGAAGGAGTTCCTCAC 14314 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || | |||||| | ||| |||||||||| || ||| ||||| ||||| Sbjct 14313 GGATGCCCTTCCCGTCGCTCTCCTCGGCATGAACGCCAATCTTATGCGCCAGTACATTGA 14254 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || || || ||||| ||| |||| | |||| | ||| | |||| || | | || Sbjct 14253 GTTCGTCGCAGACCGCCTGCTGGTGGCACTGGGCAACAAGAAGTTCTACAACTCCACCAA 14194 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | || ||||| | |||||||| || || |||||||| || Sbjct 14193 CCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCAAGACCAACTTCTTCGAGAAGCG 14134 Query 61917 TGTAGGCGACTATCA 61931 || || ||||| || Sbjct 14133 CGTTGGTGACTACCA 14119 Score = 143 bits (158), Expect = 2e-29 Identities = 236/332 (71%), Gaps = 9/332 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| ||||| || |||||||||| |||||| ||||| | Sbjct 15014 ATCTGGCAGATGTACAAGAAGGCTGAAGCCTCTTTCTGGACGGCTGAGGAGATCGATCTC 14955 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | |||| | | ||| || ||| | ||||| Sbjct 14954 TCCAAGGACCTTCACGACTGGAACAAGCGTCTCAACGA-CGATGAGCGCTTCTTCATCTC 14896 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || || || |||||||| ||||| | | || || Sbjct 14895 CCACGTCCTCGCTTTCTTCGCCGCCTCTGATGGCATCGTCAACGAGAACCTTGTCGAGCG 14836 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| || | | |||| || | | ||||| || || ||||||||||||||||| | Sbjct 14835 TTTCAGCTCCG-AGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGA 14777 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| | ||||| |||| ||| | | |||||||| || ||||| || |||| Sbjct 14776 TGGAGAACATTCACTCCGAGACCTACTCTCTCCTCATCGACACCTACATTAGCGAGCCCA 14717 Query 61382 CGGAACGTGAACGA-TTGTTCAATGCCATCGA 61412 | | || ||| | ||||||| |||||||| Sbjct 14716 GGCAGCG-CAACTACCTGTTCAACGCCATCGA 14686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562505361760