Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq12 268 7e-67
seq95 158 1e-33
>seq12
Length=708323
Score = 268 bits (296), Expect = 7e-67
Identities = 514/755 (68%), Gaps = 6/755 (1%)
Strand=Plus/Minus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
||||| | ||||| || || ||||| |||||||||||||| | ||| ||||| || ||
Sbjct 539384 ACAAAGGTAGGAAGTGCCAGGGATGCAAGGTTGCAGACAGCGACCTCATCAGGGGCAGTG 539325
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112
||||||||||| ||| ||| || || || ||| |||||||| | |||| || ||
Sbjct 539324 TACTCGACAATCTCGCAGCAGAGGTTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTG 539265
Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172
|||||||| ||||| |||||||||| |||| | || |||| ||||| || || | |
Sbjct 539264 CTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGACCTGAGCC 539205
Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT---ACGTACCGCCCTACCTTTG 66229
|||| ||||||| ||| || | || || || ||| ||| || ||| |
Sbjct 539204 TCAAGAATGGCGTACCAGAGCTTCTGGGCACGAACGGTCTCACG-ACC--CCGACCCTCC 539148
Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289
||||| || ||||| || ||||| || || | || |||| |||| ||
Sbjct 539147 TTCTCGTACTGCTCGTACAGAGCCTCGAACTCGTCGCCGTAGACGTCGGCAAGACCAGGG 539088
Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349
|||| || || |||||||| | ||| || | |||||| ||||| ||| || |||
Sbjct 539087 CACTCGTTGGGGCACATCAGAGTCCAGGTGCCGTTCTGTTCGACACGCTTCATGAAGAGA 539028
Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409
|| || ||||| || ||||| || || || || || || ||| || | ||||| ||
Sbjct 539027 TCGGGGATCCACAGAGCGTAAAACAGGTCACGAGCGCGAACCTCTTCCTTTCCGTGGTTC 538968
Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469
||||| | ||| ||||| |||| ||||||||||| || || ||||| ||||||||
Sbjct 538967 TTGCGGAGGTCAAGGAAGCTGAAGACATCGGCATGCCACGGCTCGAGGTAAATGGCGAAT 538908
Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529
| || ||| ||| |||||| |||||||| ||||| ||| |||||| | |||||
Sbjct 538907 GCACCGGGACGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGTACACACGG 538848
Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589
| ||| || | ||| ||||| | || |||||||| | || | || ||
Sbjct 538847 AGCATAGGAATGAGGCCGTTGCTGGTACCGTTGGTGCCAGCAATATAGCTGCCAGTAGCG 538788
Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCG 66649
|| ||| ||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct 538787 CGAATACGGTGGACATTGAGGCCGATACCACCGGCGGTCTTGGAAATCATGGCGCAGGTC 538728
Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709
|| || | | || || |||||| ||| |||| ||| | |||| |||| |||
Sbjct 538727 TTCAGGGTATCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAA 538668
Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744
|| || || ||||| || |||| ||||||
Sbjct 538667 GCCAGCTGAGGCTTGGGAGTACCGGCGTTGAAGAG 538633
Score = 120 bits (132), Expect = 2e-22
Identities = 328/494 (66%), Gaps = 14/494 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||| | | ||| || |||| ||| | |||||||||||||| |||
Sbjct 540281 TCGACAGTGAACTGGATGGGAGCAGCGGCAGCCTGGGTACGGAGATAGTACATGCCAGTC 540222
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195
||||| || ||| |||| | ||| ||||| || | | || |||| | | || |
Sbjct 540221 TTGAGACCGAGC-TTCCAACCGGCGAAGTGCATGGA-GGTGATCTTGCCCATCGTAGGAT 540164
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || || | ||||| |||||||||| | |||||| || |||||||
Sbjct 540163 CCTTCATGTGAATGTTGAGGGACTGCGACTGATCGATGAAGGCACCACGGTCAGCAGCCA 540104
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | | ||| ||| || | |||||||||||||||||| | ||| | | | |||
Sbjct 540103 TCTGGACGATGGTACGCTGAGAGAGCTCCCAGACGGTCTTGTAGA-GCGCCTTGATGTCA 540045
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
|| || | ||| | ||||| || || ||||| ||||| || ||||
Sbjct 540044 TCCGGGATGTTGGGAATTTGCTGGATGGAGCCGTTGGAAGCAATGATGCGGTTCTTCATC 539985
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430
|| ||||||| ||| | |||| || | | || ||| | | |||| |||
Sbjct 539984 TGGTCCGACCACAGACCGAGGTCGACCAGGTCCTTCAGGAGCCAGG----GGTTGACGAC 539929
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
|||||||| |||| || ||||| || || ||||| || ||| || || ||| |
Sbjct 539928 CTGGAACTCACCGGCCAAGACACGGCGAGAGTAAATGTTCGAAGTGTAAGGCTCGAAGCA 539869
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| || ||| ||||| || ||||| ||||| |||||||| || || | || ||
Sbjct 539868 CTCGTTGAAGCCAAGAATCTGACTGGTAGAGGCAGTAGGCATGGGCGCAACGAGCAGGGA 539809
Query 65551 GTTTCGCAATCCGT 65564
||| || | ||||
Sbjct 539808 GTTGCGGACACCGT 539795
>seq95
Length=147769
Score = 158 bits (174), Expect = 1e-33
Identities = 299/435 (69%), Gaps = 5/435 (1%)
Strand=Plus/Minus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||||| ||||||||| | || ||||||||||| || || | ||||| ||| ||
Sbjct 14549 GCTTTTGCGGCTGTCGAGGGTATCTTCTTCAGTGGATCCTTCGCTTCCATCTTCTGGCTG 14490
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || ||||||||||| || ||| || ||| | || || || ||||||
Sbjct 14489 AAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAACGAGCTCATCTCTCGTGACGAG 14430
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTC 61676
|| |||||| || || ||| |||| ||| | | ||| || ||| | || |
Sbjct 14429 GGTATGCATACCGACTTCGCTTGCCTGCTGTTCTCGCAC-ATCAAGTCGAA--GCCCAGC 14373
Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
| || || | |||| | ||||| ||| |||||| |||| || || ||
Sbjct 14372 CCCGATGC-CGTCGAGAAGATCATCACCGAGGCCGTAGATATCGAGAAGGAGTTCCTCAC 14314
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
|| || | |||||| | ||| |||||||||| || ||| ||||| |||||
Sbjct 14313 GGATGCCCTTCCCGTCGCTCTCCTCGGCATGAACGCCAATCTTATGCGCCAGTACATTGA 14254
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|| || || ||||| ||| |||| | |||| | ||| | |||| || | | ||
Sbjct 14253 GTTCGTCGCAGACCGCCTGCTGGTGGCACTGGGCAACAAGAAGTTCTACAACTCCACCAA 14194
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||| || || |||||||| | || ||||| | |||||||| || || |||||||| ||
Sbjct 14193 CCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCAAGACCAACTTCTTCGAGAAGCG 14134
Query 61917 TGTAGGCGACTATCA 61931
|| || ||||| ||
Sbjct 14133 CGTTGGTGACTACCA 14119
Score = 143 bits (158), Expect = 2e-29
Identities = 236/332 (71%), Gaps = 9/332 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| ||||| || |||||||||| |||||| ||||| |
Sbjct 15014 ATCTGGCAGATGTACAAGAAGGCTGAAGCCTCTTTCTGGACGGCTGAGGAGATCGATCTC 14955
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| ||| | | |||||| | |||| | | ||| || ||| | |||||
Sbjct 14954 TCCAAGGACCTTCACGACTGGAACAAGCGTCTCAACGA-CGATGAGCGCTTCTTCATCTC 14896
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| || | || ||||| ||||| || || || |||||||| ||||| | | || ||
Sbjct 14895 CCACGTCCTCGCTTTCTTCGCCGCCTCTGATGGCATCGTCAACGAGAACCTTGTCGAGCG 14836
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
|||| || | | |||| || | | ||||| || || ||||||||||||||||| |
Sbjct 14835 TTTCAGCTCCG-AGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGA 14777
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
||||||| | ||||| |||| ||| | | |||||||| || ||||| || ||||
Sbjct 14776 TGGAGAACATTCACTCCGAGACCTACTCTCTCCTCATCGACACCTACATTAGCGAGCCCA 14717
Query 61382 CGGAACGTGAACGA-TTGTTCAATGCCATCGA 61412
| | || ||| | ||||||| ||||||||
Sbjct 14716 GGCAGCG-CAACTACCTGTTCAACGCCATCGA 14686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397562505361760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |