Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq6 111 7e-19
>seq6
Length=856404
Score = 111 bits (122), Expect = 7e-19
Identities = 350/528 (66%), Gaps = 17/528 (3%)
Strand=Plus/Minus
Query 448662 CGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGCAACTTGCCCTCGGTGGGCTGCC 448721
|||||||||| || || | || || || |||| ||| | |||||||||||||| |
Sbjct 48387 CGCGCTCCATCTCTCCGAGACGCAGACCACCGTCGCGCGAACGACCCTCGGTGGGCTGAC 48328
Query 448722 GCGTGAGGAGCGAGTACGGTCCCCTCT-GC-CGCGTGTGCATCTTCTCCGAGGCCAGTTG 448779
|||| || | | |||| ||| | || |||| ||||||||| ||| | ||| ||
Sbjct 48327 GCGTCAGAATGGC--ACGGGGCCCGCGAGCACGCGAGTGCATCTTGTCCTGGACCATGTG 48270
Query 448780 CTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGCGGCACGGCATCATCTCGCCCGT 448839
|||||| ||||| || ||| ||| || |||| | | | |||| |||||| ||
Sbjct 48269 CTTGAGCTTCTGGTAGTAGATGGGGCCGAAGAAGACGTAGGCGGGCAGGCACTCGCCGGT 48210
Query 448840 CTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCGATCATGCCCCTCTCCTCCA---T 448896
|||| ||| | || |||||| | | ||| | ||| |||| || |
Sbjct 48209 GATGCCGCTCGTCAGCATGTCCTTGCCG--GAGTACGAGAA-GCCTGCCTCCAACAAAAT 48153
Query 448897 GTAGTCCATGAGCTCGGCCACGGAGAGGTCCGAAAAGGCCGTGCCGTCCTGCGGCAAGCC 448956
| |||| |||||| |||| | ||||| | |||||||| |||| | |||
Sbjct 48152 CTGCGACATGTCTTCGGCCTTGGAGCCG-CCGAA--GCACGTGCCGTACTGCAGGTCGCC 48096
Query 448957 GCTC-TCACAGCCCGTGATGGCCTGGAGGGCCTCGAGCAACATGGCGTAGGTCATGCGCG 449015
| || | || ||| | || | ||| |||||||| | || || ||||| ||||
Sbjct 48095 GTTCATGAC-GCCTGCTTTGCCGGCGAGCAGCTCGAGCATCTTGCCGACCGTCATACGCG 48037
Query 449016 ACGGGTAGGCATGCGGGTTCATGATGATGT-CGGGCGTCTCGCCGGCCGCGTTGAAGGGC 449074
| ||| | | ||||||||||||||||||| ||||| | ||| |||||||||||
Sbjct 48036 AGGGGAAACCGTGCGGGTTCATGATGATGTCCGGGCAAAT-GCCTTGGTCGTTGAAGGGC 47978
Query 449075 ATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGGCTGCAGAAC 449134
||||| | | | | | | |||| ||| || ||||| |||||||| | |||||
Sbjct 47977 ATGTCGACCTGCTCTGCGATGATGCCGACGACACCTTTCTGTCCGTGGCGAGAGGAGAAC 47918
Query 449135 TTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGATG 449182
||||| ||| | ||||| |||| || ||| | ||||||||||
Sbjct 47917 TTGTCGCCCAGTTCGGGTCTGCGGGTCTGGCGGGTCTGGATCTTGATG 47870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084708171262932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |