Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6 111 7e-19 >seq6 Length=856404 Score = 111 bits (122), Expect = 7e-19 Identities = 350/528 (66%), Gaps = 17/528 (3%) Strand=Plus/Minus Query 448662 CGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGCAACTTGCCCTCGGTGGGCTGCC 448721 |||||||||| || || | || || || |||| ||| | |||||||||||||| | Sbjct 48387 CGCGCTCCATCTCTCCGAGACGCAGACCACCGTCGCGCGAACGACCCTCGGTGGGCTGAC 48328 Query 448722 GCGTGAGGAGCGAGTACGGTCCCCTCT-GC-CGCGTGTGCATCTTCTCCGAGGCCAGTTG 448779 |||| || | | |||| ||| | || |||| ||||||||| ||| | ||| || Sbjct 48327 GCGTCAGAATGGC--ACGGGGCCCGCGAGCACGCGAGTGCATCTTGTCCTGGACCATGTG 48270 Query 448780 CTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGCGGCACGGCATCATCTCGCCCGT 448839 |||||| ||||| || ||| ||| || |||| | | | |||| |||||| || Sbjct 48269 CTTGAGCTTCTGGTAGTAGATGGGGCCGAAGAAGACGTAGGCGGGCAGGCACTCGCCGGT 48210 Query 448840 CTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCGATCATGCCCCTCTCCTCCA---T 448896 |||| ||| | || |||||| | | ||| | ||| |||| || | Sbjct 48209 GATGCCGCTCGTCAGCATGTCCTTGCCG--GAGTACGAGAA-GCCTGCCTCCAACAAAAT 48153 Query 448897 GTAGTCCATGAGCTCGGCCACGGAGAGGTCCGAAAAGGCCGTGCCGTCCTGCGGCAAGCC 448956 | |||| |||||| |||| | ||||| | |||||||| |||| | ||| Sbjct 48152 CTGCGACATGTCTTCGGCCTTGGAGCCG-CCGAA--GCACGTGCCGTACTGCAGGTCGCC 48096 Query 448957 GCTC-TCACAGCCCGTGATGGCCTGGAGGGCCTCGAGCAACATGGCGTAGGTCATGCGCG 449015 | || | || ||| | || | ||| |||||||| | || || ||||| |||| Sbjct 48095 GTTCATGAC-GCCTGCTTTGCCGGCGAGCAGCTCGAGCATCTTGCCGACCGTCATACGCG 48037 Query 449016 ACGGGTAGGCATGCGGGTTCATGATGATGT-CGGGCGTCTCGCCGGCCGCGTTGAAGGGC 449074 | ||| | | ||||||||||||||||||| ||||| | ||| ||||||||||| Sbjct 48036 AGGGGAAACCGTGCGGGTTCATGATGATGTCCGGGCAAAT-GCCTTGGTCGTTGAAGGGC 47978 Query 449075 ATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGGCTGCAGAAC 449134 ||||| | | | | | | |||| ||| || ||||| |||||||| | ||||| Sbjct 47977 ATGTCGACCTGCTCTGCGATGATGCCGACGACACCTTTCTGTCCGTGGCGAGAGGAGAAC 47918 Query 449135 TTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGATG 449182 ||||| ||| | ||||| |||| || ||| | |||||||||| Sbjct 47917 TTGTCGCCCAGTTCGGGTCTGCGGGTCTGGCGGGTCTGGATCTTGATG 47870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084708171262932