Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq45 111 6e-19 >seq45 Length=280565 Score = 111 bits (122), Expect = 6e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 364353 TGAAAGCGGTAGCATTAACCCTCTCTCCTCGCAAGGCTCCCACCTTGGAGGCTACAATCT 364412 |||||| ||||||| | | || || || | || || || |||||| | | || Sbjct 62083 TGAAAGGAGTAGCATCACCTTCCTGGCCACGGAGAGCGCCGACTTTGGAGAGCAAACACT 62142 Query 364413 CCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAG 364472 | || | | | |||| ||||||||||| ||||||| | |||||||||||||||| |||| Sbjct 62143 CGATCAAGTGAGCAATTGTCATACGAGAAGGAATGGCGTGAGGGTTGATGATGATATCAG 62202 Query 364473 GCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTT 364531 || | || ||| ||| ||||||||||| ||| || || | | | | ||||||||| Sbjct 62203 GCGTGAGACCTTCACGGGTGAAGGGCATATCCTCGTGGCGGTA-GGTAATACCAATGGTA 62261 Query 364532 CCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 ||||| || | | ||||| || |||||||| || || Sbjct 62262 CCCTTCTGACCGTGACGAGAGGCGAACTTGTCACCGAT 62299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884859013778662