Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq45 111 6e-19
>seq45
Length=280565
Score = 111 bits (122), Expect = 6e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 364353 TGAAAGCGGTAGCATTAACCCTCTCTCCTCGCAAGGCTCCCACCTTGGAGGCTACAATCT 364412
|||||| ||||||| | | || || || | || || || |||||| | | ||
Sbjct 62083 TGAAAGGAGTAGCATCACCTTCCTGGCCACGGAGAGCGCCGACTTTGGAGAGCAAACACT 62142
Query 364413 CCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAG 364472
| || | | | |||| ||||||||||| ||||||| | |||||||||||||||| ||||
Sbjct 62143 CGATCAAGTGAGCAATTGTCATACGAGAAGGAATGGCGTGAGGGTTGATGATGATATCAG 62202
Query 364473 GCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTT 364531
|| | || ||| ||| ||||||||||| ||| || || | | | | |||||||||
Sbjct 62203 GCGTGAGACCTTCACGGGTGAAGGGCATATCCTCGTGGCGGTA-GGTAATACCAATGGTA 62261
Query 364532 CCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCAAT 364569
||||| || | | ||||| || |||||||| || ||
Sbjct 62262 CCCTTCTGACCGTGACGAGAGGCGAACTTGTCACCGAT 62299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884859013778662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |