Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11]
11,700 sequences; 44,242,179 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq293 266 5e-69
seq43 264 2e-68
seq291 262 6e-68
seq292 244 2e-62
seq619 188 1e-45
seq495 161 1e-37
seq44 129 9e-28
>seq293
Length=819
Score = 266 bits (294), Expect = 5e-69
Identities = 201/230 (87%), Gaps = 5/230 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||| |||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 67 GTACAAAGG-CAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 123
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 124 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 183
Query 120 ACCCGGACCTGTCGGCCAAGGTG-ATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| ||||| |||| ||||| | | | |||||||| | ||||||||||||||||||
Sbjct 184 ACCCAGACCTTTCGGTCAAGGAGGAAAAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGC 243
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 293
>seq43
Length=721
Score = 264 bits (292), Expect = 2e-68
Identities = 200/229 (87%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 332 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 275
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 274 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 215
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| |||| ||||| || | |||||||| | |||||||||||||||||||
Sbjct 214 ACCCAGACCTTTCGGTCAAGGAGAAAAACTCGTTGC-TCTGTCAGTGTAGCGCGCGTGCG 156
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 155 GCCCAGAACATCTAA-GGCATCACAGACCTGTTATTGCCTCAAACTTCC 108
>seq291
Length=406
Score = 262 bits (290), Expect = 6e-68
Identities = 200/230 (87%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 101 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 158
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 159 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 218
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGT-GTAGCGCGCGTGC 178
|||| |||| |||| ||||| || | |||||||| | ||||| |||||||||||||
Sbjct 219 ACCC--ACCTTTCGGTCAAGGAGAAAAACTCGTTGGCTCTGTCAGTTGTAGCGCGCGTGC 276
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 277 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 326
>seq292
Length=365
Score = 244 bits (270), Expect = 2e-62
Identities = 201/234 (86%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 101 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 158
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 159 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 218
Query 120 ACCCGGACCTGTCGGCCAAGGTG-ATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| ||||| |||| ||||| | | | |||||||| | ||||||||||||||||||
Sbjct 219 ACCCAGACCTTTCGGTCAAGGAGAAAAAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGC 278
Query 179 GGCCCAGAACATCT-AAGGGCAT-CACAGACCTGTTATTG-CCTCAAA-CTTCC 228
|||||||||||||| |||||||| |||||||||||||||| ||||||| |||||
Sbjct 279 GGCCCAGAACATCTAAAGGGCATCCACAGACCTGTTATTGACCTCAAACCTTCC 332
>seq619
Length=293
Score = 188 bits (208), Expect = 1e-45
Identities = 164/196 (84%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 193 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 136
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 135 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 76
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCG-TTGAATACATCAGTGTAGCGCGCGTGC 178
|||| | ||| |||| ||||| || | ||||| ||| | |||||| |||||||||||
Sbjct 75 ACCCAG-CCTTTCGGTCAAGGAGAAAAACTCGTTTGGCTCTGTCAGTGAAGCGCGCGTGC 17
Query 179 GGCCCAGAAC-ATCTA 193
|||||||||| |||||
Sbjct 16 GGCCCAGAACAATCTA 1
>seq495
Length=264
Score = 161 bits (178), Expect = 1e-37
Identities = 132/155 (85%), Gaps = 4/155 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 164 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 107
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 106 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 47
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTG 154
|||| ||||| |||| ||||| || | ||||||||
Sbjct 46 ACCCAGACCTTTCGGTCAAGGAGA-AAACTCGTTG 13
>seq44
Length=446
Score = 129 bits (142), Expect = 9e-28
Identities = 116/138 (84%), Gaps = 6/138 (4%)
Strand=Plus/Minus
Query 1 GTACAAAG-GGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59
||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| |||
Sbjct 137 GTACAAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT- 80
Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCC-ATCAC-GATGAAATTTCA-AAG 116
|||||||||||| ||| |||||||||| ||||||||| | ||| || | ||| | |||
Sbjct 79 CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAAGCACTGACAGAGTTTAACAAG 20
Query 117 ATTACCCGGACCTGTCGG 134
||||||| ||||| ||||
Sbjct 19 ATTACCCAGACCTTTCGG 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751914765500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |