Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq293 266 5e-69 seq43 264 2e-68 seq291 262 6e-68 seq292 244 2e-62 seq619 188 1e-45 seq495 161 1e-37 seq44 129 9e-28 >seq293 Length=819 Score = 266 bits (294), Expect = 5e-69 Identities = 201/230 (87%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| |||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 67 GTACAAAGG-CAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 123 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 124 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 183 Query 120 ACCCGGACCTGTCGGCCAAGGTG-ATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| |||| ||||| | | | |||||||| | |||||||||||||||||| Sbjct 184 ACCCAGACCTTTCGGTCAAGGAGGAAAAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGC 243 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 244 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 293 >seq43 Length=721 Score = 264 bits (292), Expect = 2e-68 Identities = 200/229 (87%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 332 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 275 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 274 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 215 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| ||||| || | |||||||| | ||||||||||||||||||| Sbjct 214 ACCCAGACCTTTCGGTCAAGGAGAAAAACTCGTTGC-TCTGTCAGTGTAGCGCGCGTGCG 156 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 155 GCCCAGAACATCTAA-GGCATCACAGACCTGTTATTGCCTCAAACTTCC 108 >seq291 Length=406 Score = 262 bits (290), Expect = 6e-68 Identities = 200/230 (87%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 101 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 158 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 159 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 218 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGT-GTAGCGCGCGTGC 178 |||| |||| |||| ||||| || | |||||||| | ||||| ||||||||||||| Sbjct 219 ACCC--ACCTTTCGGTCAAGGAGAAAAACTCGTTGGCTCTGTCAGTTGTAGCGCGCGTGC 276 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 277 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 326 >seq292 Length=365 Score = 244 bits (270), Expect = 2e-62 Identities = 201/234 (86%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 101 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 158 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 159 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 218 Query 120 ACCCGGACCTGTCGGCCAAGGTG-ATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| |||| ||||| | | | |||||||| | |||||||||||||||||| Sbjct 219 ACCCAGACCTTTCGGTCAAGGAGAAAAAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGC 278 Query 179 GGCCCAGAACATCT-AAGGGCAT-CACAGACCTGTTATTG-CCTCAAA-CTTCC 228 |||||||||||||| |||||||| |||||||||||||||| ||||||| ||||| Sbjct 279 GGCCCAGAACATCTAAAGGGCATCCACAGACCTGTTATTGACCTCAAACCTTCC 332 >seq619 Length=293 Score = 188 bits (208), Expect = 1e-45 Identities = 164/196 (84%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 193 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 136 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 135 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 76 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCG-TTGAATACATCAGTGTAGCGCGCGTGC 178 |||| | ||| |||| ||||| || | ||||| ||| | |||||| ||||||||||| Sbjct 75 ACCCAG-CCTTTCGGTCAAGGAGAAAAACTCGTTTGGCTCTGTCAGTGAAGCGCGCGTGC 17 Query 179 GGCCCAGAAC-ATCTA 193 |||||||||| ||||| Sbjct 16 GGCCCAGAACAATCTA 1 >seq495 Length=264 Score = 161 bits (178), Expect = 1e-37 Identities = 132/155 (85%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 164 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 107 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 106 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 47 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTG 154 |||| ||||| |||| ||||| || | |||||||| Sbjct 46 ACCCAGACCTTTCGGTCAAGGAGA-AAACTCGTTG 13 >seq44 Length=446 Score = 129 bits (142), Expect = 9e-28 Identities = 116/138 (84%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 1 GTACAAAG-GGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| Sbjct 137 GTACAAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT- 80 Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCC-ATCAC-GATGAAATTTCA-AAG 116 |||||||||||| ||| |||||||||| ||||||||| | ||| || | ||| | ||| Sbjct 79 CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAAGCACTGACAGAGTTTAACAAG 20 Query 117 ATTACCCGGACCTGTCGG 134 ||||||| ||||| |||| Sbjct 19 ATTACCCAGACCTTTCGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751914765500