Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11]
11,700 sequences; 44,242,179 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq822 506 4e-141
seq305 500 2e-139
seq1158 338 1e-90
seq936 208 1e-51
seq980 143 5e-32
seq293 143 5e-32
>seq822
Length=844
Score = 506 bits (560), Expect = 4e-141
Identities = 302/315 (96%), Gaps = 1/315 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 727 TGGTCCGACCGGGTCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 668
Query 65 GCCAGGACTTTTACTTT-GAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 667 ACCAGGACTTTTACTTTCGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACA 608
Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 607 TTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 548
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 547 TAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTG 488
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 487 GATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTG 428
Query 304 AACGAAAGTTAGGGG 318
|||||||||||||||
Sbjct 427 AACGAAAGTTAGGGG 413
>seq305
Length=782
Score = 500 bits (554), Expect = 2e-139
Identities = 300/314 (96%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 724 TGGTCCGACCGGGTCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 665
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 664 ACCAGGACTTTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 605
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 604 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 545
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 544 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 485
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||
Sbjct 484 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATG-TTTCATTAATCAGTGA 426
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 425 ACGAAAGTTAGGGG 412
>seq1158
Length=352
Score = 338 bits (374), Expect = 1e-90
Identities = 215/228 (94%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 125 TGGTCCGACCGGGTCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 184
Query 65 GCCAGGACTTTT-ACTTTGAAAA-AATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAC 122
||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 185 ACCAGGACTTTTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATAC 244
Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT-ATTTTGTTGGTTTCTAGGACCGC 181
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 245 ATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTGATTTTGTTGGTTTCTAGGACCGC 304
Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAA-TTGTCA 228
|||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 305 CGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTTGTCA 352
>seq936
Length=501
Score = 208 bits (230), Expect = 1e-51
Identities = 134/144 (93%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 144 TGGTCCGACCGGGTCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 85
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG-CAGGCCTTTG-CTCGAATAC 122
|||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||
Sbjct 84 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCCAGGCCTATGACTCGAATAC 25
Query 123 ATTAGCATGGAATAATAGAATAGG 146
||||||| |||||||||||||||
Sbjct 24 ATTAGCAAAGAATAATAGAATAGG 1
>seq980
Length=526
Score = 143 bits (158), Expect = 5e-32
Identities = 101/109 (93%), Gaps = 5/109 (5%)
Strand=Plus/Minus
Query 214 AGTATTCAATT-GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA- 271
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 AGTATTCAATTTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAT 467
Query 272 GC-GTTCACCAA-GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| || |||| ||||| ||||||||||||||||||||||||||||||
Sbjct 466 GCATTTGGCCAAGGGATG-TTTCATTAATCAGTGAACGAAAGTTAGGGG 419
>seq293
Length=819
Score = 143 bits (158), Expect = 5e-32
Identities = 101/109 (93%), Gaps = 5/109 (5%)
Strand=Plus/Minus
Query 214 AGTATTCAATT-GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA- 271
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 AGTATTCAATTTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAT 760
Query 272 GC-GTTCACCAA-GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| || |||| ||||| ||||||||||||||||||||||||||||||
Sbjct 759 GCATTTGGCCAAGGGATG-TTTCATTAATCAGTGAACGAAAGTTAGGGG 712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915092921600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |