Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11]
11,700 sequences; 44,242,179 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq437 825 0.0
seq327 262 2e-67
>seq437
Length=1572
Score = 825 bits (914), Expect = 0.0
Identities = 586/664 (88%), Gaps = 7/664 (1%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 1394 TGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGAGGTATAT 1335
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1334 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1275
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1274 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 1215
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGG--CCGGTGCACT-CTTCTGC 259
|||| ||||||||| | || | ||| | || | ||| || ||| ||| | ||
Sbjct 1214 GCAATCAGACTTGCACTTGGT-GTTCATCAGGGTC-TCGTACCCTGTGTACTTCATCAA- 1158
Query 260 GGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319
| ||||||||||||||| | | | ||| ||||||||| | ||||||||||| |||||
Sbjct 1157 GTTCAGGCCAGCATCAGTTTGAGTGGTTAGATAAAGGCTTAGAGAATGTGGCCCTCTTCG 1098
Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379
|||| ||||||||| | |||| |||| ||| | |||||||||| ||||||| |||||
Sbjct 1097 GGGG-TGTTATAGCTCTAGGTGCAATGTAGCCTACTTGGACTGAGGACCGCGCTTCGGCT 1039
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| || |
Sbjct 1038 AGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTGTACC 979
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
||||||||||||||||||| |||||| | ||||||||||||||||||| |||| ||
Sbjct 978 TAATATGCGAGTGTTTGGGTGTTAAACCCATACGCGTAATGAAAGTGAACGCTGGTGAGA 919
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
|||| | |||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 918 ACCCTTAAGGGTGCATCATCGACCGATCTTGATGTCTTCGGATGGATTTGAGTAAGAGCA 859
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | || ||||||||||||||||| |||| | |||||||||||||||||||||||||
Sbjct 858 TATTGGGTGCGACCCGAAAGATGGTGATCTATACGTGAATAGGGTGAAGCCAGAGGAAAC 799
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 798 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGCGTATAGGG 739
Query 680 GCGA 683
||||
Sbjct 738 GCGA 735
>seq327
Length=507
Score = 262 bits (290), Expect = 2e-67
Identities = 163/171 (95%), Gaps = 3/171 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 171 TGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGAGGTATAT 112
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG- 141
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 52
Query 142 ATGAAAAGCACTTTGGAAAGAG-AGTTAAAAAGCACG-TGAAATTGTTGAA 190
|||||||||||||||||||||| ||||||| || ||| |||||||||||||
Sbjct 51 ATGAAAAGCACTTTGGAAAGAGAAGTTAAACAGTACGATGAAATTGTTGAA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079749035000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |