Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11]
11,700 sequences; 44,242,179 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq619 100 2e-19
seq495 100 2e-19
seq292 100 2e-19
seq291 100 2e-19
seq43 100 2e-19
seq44 95.1 7e-18
seq293 87.8 1e-15
>seq619
Length=293
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||
Sbjct 242 TCCGAAAGC-CTCACTTAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAA 186
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 185 GGCAGGGACGTAAT-CAACGCAAGCT 161
>seq495
Length=264
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||
Sbjct 213 TCCGAAAGC-CTCACTTAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAA 157
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 156 GGCAGGGACGTAAT-CAACGCAAGCT 132
>seq292
Length=365
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||
Sbjct 52 TCCGAAAGC-CTCACTTAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAA 108
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 109 GGCAGGGACGTAAT-CAACGCAAGCT 133
>seq291
Length=406
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||
Sbjct 52 TCCGAAAGC-CTCACTTAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAA 108
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 109 GGCAGGGACGTAAT-CAACGCAAGCT 133
>seq43
Length=721
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||
Sbjct 381 TCCGAAAGC-CTCACTTAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAA 325
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 324 GGCAGGGACGTAAT-CAACGCAAGCT 300
>seq44
Length=446
Score = 95.1 bits (104), Expect = 7e-18
Identities = 77/87 (89%), Gaps = 5/87 (6%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTAC-AAA 97
|||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||| |||
Sbjct 186 TCCGAAAGC-CTCACTTAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAA 130
Query 98 GGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 129 AGGCAGGGACGTAAT-CAACGCAAGCT 104
>seq293
Length=819
Score = 87.8 bits (96), Expect = 1e-15
Identities = 69/76 (91%), Gaps = 5/76 (7%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| ||| |||||||| ||||||||||| ||||||||| ||||||||||
Sbjct 28 CTCACTTAGCCATT-CAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAA-GGCAGGGACG 83
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 84 TAAT-CAACGCAAGCT 98
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300767006000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |