Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11]
11,700 sequences; 44,242,179 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq305 181 1e-43
seq822 170 2e-40
seq1158 167 3e-39
seq936 129 7e-28
>seq305
Length=782
Score = 181 bits (200), Expect = 1e-43
Identities = 159/193 (82%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 554 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 613
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||| ||||| |||| ||||||||||||||||| | ||
Sbjct 614 AGCATAGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 673
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182
|| ||| |||| ||||| | ||||| ||| ||| | | | ||| |||| | |||
Sbjct 674 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGACCCGGTCGGACCAGTGCACGC 732
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 733 GGTGAGGCGGACC 745
>seq822
Length=844
Score = 170 bits (188), Expect = 2e-40
Identities = 131/150 (87%), Gaps = 4/150 (3%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 556 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 615
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTC-AAGGTAAAAGTCCTGGTTCCTCCGC 124
|| || |||||||||||||||||||||||| || || ||||||||||||||||| | |
Sbjct 616 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCGAAAGTAAAAGTCCTGGTTCCCCGAC 675
Query 125 ACA-CCAATGAA-GGCATACGGGCTCACCA 152
||| ||| |||| ||||| | ||||| |||
Sbjct 676 ACACCCAGTGAAGGGCATGC-GGCTCCCCA 704
>seq1158
Length=352
Score = 167 bits (184), Expect = 3e-39
Identities = 160/196 (82%), Gaps = 7/196 (4%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACG-CACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
||||||||||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct 298 CTAGAAACCAACAAAATCAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTC 239
Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAA-TTTTCTCAAGGT-AAAAGTCCTGGTTCCTCC 122
| || || |||||||||||||||||||| |||| |||| || ||||||||||||||| |
Sbjct 238 GAGCATAGGCCTGCTTTGAACACTCTAATTTTTTTCAAAGTAAAAAGTCCTGGTTCCCCG 179
Query 123 GCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACT 179
|||| ||| |||| ||||| | ||||| ||| ||| | | | ||| |||| |
Sbjct 178 ACACACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGACCCGGTCGGACCAGTGCA 120
Query 180 CGCCGTGAGGCGGACC 195
||| ||||||||||||
Sbjct 119 CGCGGTGAGGCGGACC 104
>seq936
Length=501
Score = 129 bits (142), Expect = 7e-28
Identities = 133/166 (80%), Gaps = 6/166 (4%)
Strand=Plus/Plus
Query 35 CCTATTCTATTATTCCATGCTAATGTATTCGGG-CGTAAGCCTG-CTTTGAACACTCTAA 92
||||||||||||||| |||||||||||||| | | || ||||| |||||||||||||||
Sbjct 1 CCTATTCTATTATTCTTTGCTAATGTATTCGAGTCATAGGCCTGGCTTTGAACACTCTAA 60
Query 93 TTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAA-GGCATACGGGCTCAC 150
|||| |||| ||||||||||||||||| | |||| ||| |||| ||||| | ||||| |
Sbjct 61 TTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACACACCCAGTGAAGGGCATGC-GGCTCCC 119
Query 151 CAAGAGGTAGGGCTGGGT-AATGCAGTACTCGCCGTGAGGCGGACC 195
|| ||| | | | ||| |||| | ||| ||||||||||||
Sbjct 120 CAGAAGGAAAGACCCGGTCGGACCAGTGCACGCGGTGAGGCGGACC 165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595132537800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |