Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq305 181 1e-43 seq822 170 2e-40 seq1158 167 3e-39 seq936 129 7e-28 >seq305 Length=782 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 554 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 613 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||| ||||| |||| ||||||||||||||||| | || Sbjct 614 AGCATAGGCCTGCTTTGAACACTCTGATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 673 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182 || ||| |||| ||||| | ||||| ||| ||| | | | ||| |||| | ||| Sbjct 674 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGACCCGGTCGGACCAGTGCACGC 732 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 733 GGTGAGGCGGACC 745 >seq822 Length=844 Score = 170 bits (188), Expect = 2e-40 Identities = 131/150 (87%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 556 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 615 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTC-AAGGTAAAAGTCCTGGTTCCTCCGC 124 || || |||||||||||||||||||||||| || || ||||||||||||||||| | | Sbjct 616 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCGAAAGTAAAAGTCCTGGTTCCCCGAC 675 Query 125 ACA-CCAATGAA-GGCATACGGGCTCACCA 152 ||| ||| |||| ||||| | ||||| ||| Sbjct 676 ACACCCAGTGAAGGGCATGC-GGCTCCCCA 704 >seq1158 Length=352 Score = 167 bits (184), Expect = 3e-39 Identities = 160/196 (82%), Gaps = 7/196 (4%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACG-CACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| Sbjct 298 CTAGAAACCAACAAAATCAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTC 239 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAA-TTTTCTCAAGGT-AAAAGTCCTGGTTCCTCC 122 | || || |||||||||||||||||||| |||| |||| || ||||||||||||||| | Sbjct 238 GAGCATAGGCCTGCTTTGAACACTCTAATTTTTTTCAAAGTAAAAAGTCCTGGTTCCCCG 179 Query 123 GCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACT 179 |||| ||| |||| ||||| | ||||| ||| ||| | | | ||| |||| | Sbjct 178 ACACACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGACCCGGTCGGACCAGTGCA 120 Query 180 CGCCGTGAGGCGGACC 195 ||| |||||||||||| Sbjct 119 CGCGGTGAGGCGGACC 104 >seq936 Length=501 Score = 129 bits (142), Expect = 7e-28 Identities = 133/166 (80%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 35 CCTATTCTATTATTCCATGCTAATGTATTCGGG-CGTAAGCCTG-CTTTGAACACTCTAA 92 ||||||||||||||| |||||||||||||| | | || ||||| ||||||||||||||| Sbjct 1 CCTATTCTATTATTCTTTGCTAATGTATTCGAGTCATAGGCCTGGCTTTGAACACTCTAA 60 Query 93 TTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAA-GGCATACGGGCTCAC 150 |||| |||| ||||||||||||||||| | |||| ||| |||| ||||| | ||||| | Sbjct 61 TTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACACACCCAGTGAAGGGCATGC-GGCTCCC 119 Query 151 CAAGAGGTAGGGCTGGGT-AATGCAGTACTCGCCGTGAGGCGGACC 195 || ||| | | | ||| |||| | ||| |||||||||||| Sbjct 120 CAGAAGGAAAGACCCGGTCGGACCAGTGCACGCGGTGAGGCGGACC 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595132537800