Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq305 288 1e-75 seq822 286 4e-75 seq1158 230 2e-58 seq936 118 1e-24 >seq305 Length=782 Score = 288 bits (318), Expect = 1e-75 Identities = 179/191 (94%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| Sbjct 667 GGAACCAGGACTTTTACTTTGAAAAAATCAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 608 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 607 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 549 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 548 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 489 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 488 TTGGATTTATT 478 >seq822 Length=844 Score = 286 bits (316), Expect = 4e-75 Identities = 180/192 (94%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTT-GAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAAT 59 |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct 670 GGAACCAGGACTTTTACTTTCGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAAT 611 Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119 |||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 610 ACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG 551 Query 120 CCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179 |||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct 550 -CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATT 492 Query 180 CTTGGATTTATT 191 |||||||||||| Sbjct 491 CTTGGATTTATT 480 >seq1158 Length=352 Score = 230 bits (254), Expect = 2e-58 Identities = 158/172 (92%), Gaps = 5/172 (3%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTT-ACTTTGAAAA-AATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAA 58 ||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||||| Sbjct 182 GGAACCAGGACTTTTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAA 241 Query 59 TACATTACCATGGAATAATAGAATAGGACGTGCGGTTCT-ATTTTGTAGGTTTCTAGGAC 117 ||||||| |||||||||||||||||||||||| |||||| ||||||| |||||||||||| Sbjct 242 TACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTGATTTTGTTGGTTTCTAGGAC 301 Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAA-TTGTCA 168 || |||||||||| |||| ||||||||||||| ||||||||||| |||||| Sbjct 302 CG-CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTTGTCA 352 >seq936 Length=501 Score = 118 bits (130), Expect = 1e-24 Identities = 80/87 (92%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAG-CAGGCCTTTG-CTCGAA 58 ||||||||||||||||||||||||||||||||| |||||||| ||||||| || |||||| Sbjct 87 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCCAGGCCTATGACTCGAA 28 Query 59 TACATTACCATGGAATAATAGAATAGG 85 ||||||| || ||||||||||||||| Sbjct 27 TACATTAGCAAAGAATAATAGAATAGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511941968000