Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11]
11,700 sequences; 44,242,179 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq783 250 4e-64
seq96 250 4e-64
seq3733 150 3e-34
seq3732 150 3e-34
seq2219 150 3e-34
seq134 150 3e-34
seq657 129 1e-27
seq658 111 3e-22
>seq783
Length=534
Score = 250 bits (276), Expect = 4e-64
Identities = 228/280 (81%), Gaps = 7/280 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || ||||| ||||||||||| ||| ||||||||| |||||||
Sbjct 68 GTACGAGAGGAACCGCTGA--TCAGA-TAATTGGTTTT-GCG-CTGTCTGACAAGGCAGT 122
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 123 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCTTGCCA 182
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTA-GTCGGATACGAATAGG-CTTCGGCCCCGA 178
||| | ||||||| || ||||||||| |||||||||||||||| ||| ||||| ||
Sbjct 183 GAAAGCGGTGATTTATACCCACACATCGTAGGTCGGATACGAATAGGCCTTTGGCCCTGA 242
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238
| |||||| ||| || ||||| | | | ||| | | | | |||||| |||
Sbjct 243 ATCTTAGCTGGCTGGTAACGGTCCTATTGAAGAAACTCTTTAGGACTAACTGGCGTCTTG 302
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| || ||||| ||| | ||||||||||| |||||
Sbjct 303 CAATTTTACAATGCGTGGGGTTGAATCCTTTGCATACGAC 342
>seq96
Length=1803
Score = 250 bits (276), Expect = 4e-64
Identities = 176/196 (90%), Gaps = 5/196 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 248 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 191
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 190 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 131
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCC--G 177
||| | ||||||| || ||||||||||||||||||||||||| ||| |||||| |
Sbjct 130 GAAAGCGGTGATTTATACCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCCTGG 71
Query 178 AACCTTAGCAGGCCGG 193
|| |||||| ||| ||
Sbjct 70 AATCTTAGCTGGCTGG 55
>seq3733
Length=375
Score = 150 bits (166), Expect = 3e-34
Identities = 154/199 (77%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 83 GATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGC 142
||| ||||||||||||||||||||||||||||||||||||| | ||||||| || |
Sbjct 1 GATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAAGCGGTGATTTATACCCAC 60
Query 143 ACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA--CCTTAGCAGGCCGGCAACGG 199
|||||||||||||||||||||||| ||| ||||| ||| | ||||| ||| || |||||
Sbjct 61 ACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAATTCTTTAGCTGGCTGGTAACGG 120
Query 200 GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGA 259
| | | ||| | | | | |||||| ||||||||| || ||||| |||
Sbjct 121 TCCTATTGAAGAAACTCTTTAGGACTAACTGGCGTCTTGCAATTTTACAATGCGTGGGGT 180
Query 260 TAAATCCTTTGCAGACGAC 278
| ||||||||||| |||||
Sbjct 181 TGAATCCTTTGCATACGAC 199
>seq3732
Length=408
Score = 150 bits (166), Expect = 3e-34
Identities = 154/199 (77%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 83 GATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGC 142
||| ||||||||||||||||||||||||||||||||||||| | ||||||| || |
Sbjct 1 GATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAAGCGGTGATTTATACCCAC 60
Query 143 ACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA--CCTTAGCAGGCCGGCAACGG 199
|||||||||||||||||||||||| ||| ||||| ||| | ||||| ||| || |||||
Sbjct 61 ACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAATTCTTTAGCTGGCTGGTAACGG 120
Query 200 GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGA 259
| | | ||| | | | | |||||| ||||||||| || ||||| |||
Sbjct 121 TCCTATTGAAGAAACTCTTTAGGACTAACTGGCGTCTTGCAATTTTACAATGCGTGGGGT 180
Query 260 TAAATCCTTTGCAGACGAC 278
| ||||||||||| |||||
Sbjct 181 TGAATCCTTTGCATACGAC 199
>seq2219
Length=439
Score = 150 bits (166), Expect = 3e-34
Identities = 154/199 (77%), Gaps = 3/199 (2%)
Strand=Plus/Minus
Query 83 GATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGC 142
||| ||||||||||||||||||||||||||||||||||||| | ||||||| || |
Sbjct 439 GATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAAGCGGTGATTTATACCCAC 380
Query 143 ACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA--CCTTAGCAGGCCGGCAACGG 199
|||||||||||||||||||||||| ||| ||||| ||| | ||||| ||| || |||||
Sbjct 379 ACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAATTCTTTAGCTGGCTGGTAACGG 320
Query 200 GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGA 259
| | | ||| | | | | |||||| ||||||||| || ||||| |||
Sbjct 319 TCCTATTGAAGAAACTCTTTAGGACTAACTGGCGTCTTGCAATTTTACAATGCGTGGGGT 260
Query 260 TAAATCCTTTGCAGACGAC 278
| ||||||||||| |||||
Sbjct 259 TGAATCCTTTGCATACGAC 241
>seq134
Length=657
Score = 150 bits (166), Expect = 3e-34
Identities = 154/199 (77%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 83 GATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGC 142
||| ||||||||||||||||||||||||||||||||||||| | ||||||| || |
Sbjct 1 GATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAAGCGGTGATTTATACCCAC 60
Query 143 ACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA--CCTTAGCAGGCCGGCAACGG 199
|||||||||||||||||||||||| ||| ||||| ||| | ||||| ||| || |||||
Sbjct 61 ACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAATTCTTTAGCTGGCTGGTAACGG 120
Query 200 GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGA 259
| | | ||| | | | | |||||| ||||||||| || ||||| |||
Sbjct 121 TCCTATTGAAGAAACTCTTTAGGACTAACTGGCGTCTTGCAATTTTACAATGCGTGGGGT 180
Query 260 TAAATCCTTTGCAGACGAC 278
| ||||||||||| |||||
Sbjct 181 TGAATCCTTTGCATACGAC 199
>seq657
Length=398
Score = 129 bits (142), Expect = 1e-27
Identities = 155/206 (75%), Gaps = 5/206 (2%)
Strand=Plus/Plus
Query 78 TGCTGGATTATGGC-TGAACGCCTCTAAGTCAGAATCCATGCC-AGAACGGGGTGATTCT 135
|||||||| ||||| |||||||||||||||||||||||||||| |||| | |||||||
Sbjct 1 TGCTGGATAATGGCGTGAACGCCTCTAAGTCAGAATCCATGCCAAGAAAGCGGTGATTAG 60
Query 136 CTCCTGCA-CATCGTAG--TCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCG 192
|| || | |||||| |||||||||||||||| | | || ||| |||||| ||| |
Sbjct 61 TACCCACACCTTCGTAGGTTCGGATACGAATAGGCCTTTGGCCTGAATCTTAGCTGGCTG 120
Query 193 GCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGC 252
| ||||| | | | ||| | | | | |||||| ||||||||| || ||||
Sbjct 121 GTAACGGTCCTATTGAAGAAACTCTTTAGGACTAACTGGCGTCTTGCAATTTTACAATGC 180
Query 253 GCAGGGATAAATCCTTTGCAGACGAC 278
| ||| | ||||||||||| |||||
Sbjct 181 GTGGGGTTGAATCCTTTGCATACGAC 206
>seq658
Length=457
Score = 111 bits (122), Expect = 3e-22
Identities = 161/219 (74%), Gaps = 10/219 (5%)
Strand=Plus/Plus
Query 62 CCGCGAAGCTACCA-TCTGCTGGATTATGGC-TGAACGCCTCTAAGTCAGAATCCATGCC 119
||||||| |||||| |||| || ||||| ||||||||||||||||| |||||||| |
Sbjct 2 CCGCGAA-CTACCAATCTGTTGATAAATGGCGTGAACGCCTCTAAGTCATAATCCATG-C 59
Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
|||| | |||||| | | | ||||||||||||||| |||||| ||| | | |||
Sbjct 60 AGAA-GCGGTGAT--TATACCACACATCGTAGTCGGACTAGAATAGCCTTTG---CTGAA 113
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||| ||| || ||||| | | | ||| | | | | |||||| ||||
Sbjct 114 TCTTAGCTGGCTGGTAACGGTCCTATTGAAGAAACTCTTTAGGACTAACTGGCGTCTTGC 173
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || ||||| ||| | ||||||||||| |||||
Sbjct 174 AATTTTACAATGCGTGGGGTTGAATCCTTTGCATACGAC 212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819107148800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |