Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11]
11,700 sequences; 44,242,179 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq460 672 0.0
seq715 383 5e-104
seq967 378 2e-102
seq936 316 6e-84
seq252 311 3e-82
seq5953 275 2e-71
seq3002 98.7 3e-18
>seq460
Length=505
Score = 672 bits (744), Expect = 0.0
Identities = 402/415 (97%), Gaps = 5/415 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 413 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 354
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 353 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 294
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 293 TCTCAGGCTCCTTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGA-ACCATGGTA 235
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 234 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 175
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||
Sbjct 174 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAGGGAGCCCCGAAGG-CATTGGT 116
Query 301 TTTTT-ATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCT- 358
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 115 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTA 56
Query 359 AGAATTACC-ACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 55 AGAATTACCTACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 1
>seq715
Length=297
Score = 383 bits (424), Expect = 5e-104
Identities = 233/242 (96%), Gaps = 5/242 (2%)
Strand=Plus/Plus
Query 265 ATTATGAATCACCAAGG-AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCC 323
|||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1 ATTATGAATCACCACGGGAGCCCCGA--GGCATTGGTTTTTTATCTAATAAATACACCCC 58
Query 324 TTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59 TTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 118
Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 119 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATA 178
Query 444 GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTAC-TGGC 502
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 179 G-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTTGGC 237
Query 503 AG 504
||
Sbjct 238 AG 239
>seq967
Length=325
Score = 378 bits (418), Expect = 2e-102
Identities = 225/233 (97%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 93 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 152
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 153 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 212
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT-CCCCGTTACCCGTTGATACCATGGT 179
||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||||
Sbjct 213 TCTCAGGCTCCTTCTCCGGAATAGAACCCTAATTCCCCCGTTACCCGTTGAAACCATGGT 272
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG-AATGAACCA 231
| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 273 ACGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAATGAACCA 325
>seq936
Length=501
Score = 316 bits (350), Expect = 6e-84
Identities = 195/203 (96%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCC-TGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 301 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCGTGTATCAGTATTTATTGTCACTACC 360
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 361 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGT 420
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCA-TGG 178
|||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct 421 TTCTCAGGCTCCTTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGA-ACCACTGG 479
Query 179 TAGGCCACTATCCTACCATCGAA 201
||||||||||||| |||||||||
Sbjct 480 TAGGCCACTATCC-ACCATCGAA 501
>seq252
Length=1563
Score = 311 bits (344), Expect = 3e-82
Identities = 200/213 (94%), Gaps = 9/213 (4%)
Strand=Plus/Minus
Query 300 TTTTTTATCTAATAAAT-ACACCCC--TTCCGAAGT---CGGGGTTTTT--AGCATGTAT 351
||||||||||||||||| ||||||| |||||||| ||| ||||| |||||||||
Sbjct 1563 TTTTTTATCTAATAAATTACACCCCCTTTCCGAAGCGAACGGTTTTTTTTCAGCATGTAT 1504
Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 1444
Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 1443 ATTTAATGAGCCATTCGCAGTTTCACAGTATAG-TTGCTTATACTTAGACATGCATGGCT 1385
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 1384 TAATCTTTGAGACAAGCATATGACTACTGGCAG 1352
>seq5953
Length=3304
Score = 275 bits (304), Expect = 2e-71
Identities = 172/184 (93%), Gaps = 1/184 (1%)
Strand=Plus/Minus
Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216
|| |||||||| || ||||||||||||| |||||||||| | ||||||||||||||||||
Sbjct 184 CCTTTACCCGTCGAAACCATGGTAGGCCGCTATCCTACCCTAGAAAGTTGATAGGGCAGA 125
Query 217 AATTTGAATGAACCATCGCC-GGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCA 275
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 124 AATTTGAATGAACCATCGCCCGGCACAAGGCCATGCGATTCGTTAAGTTATTATGAATCA 65
Query 276 CCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG 335
||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 64 CCAGGGAGCCCCGAAGGGCATTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCAG 5
Query 336 GGTT 339
| ||
Sbjct 4 GTTT 1
>seq3002
Length=8808
Score = 98.7 bits (108), Expect = 3e-18
Identities = 79/93 (85%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 376 CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTC 435
|||||| |||| ||||||| ||||| |||||||||| ||| ||||||||||||| ||
Sbjct 157 CCATGTGACAAGGCACTATCAGATAAATGATAACTGATGTAACAAGCCATTCGCAGTGTC 98
Query 436 ACTGTATAGATTGCTTATACTTAGACATGCATG 468
|| |||||| |||||||||| |||||| |||||
Sbjct 97 ACAGTATAG-TTGCTTATAC-TAGACAAGCATG 67
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510223283200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |