Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq1245 190 4e-46
seq3935 181 2e-43
seq1923 122 2e-25
>seq1245
Length=1300
Score = 190 bits (210), Expect = 4e-46
Identities = 242/326 (74%), Gaps = 8/326 (2%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| ||| | ||||||||| || ||||| | | || |
Sbjct 584 AGGGGAGTGAAATAGATCCTGAAACCGTGTGCCTACAAGTAGTTAGAGCCCATTAATG-G 526
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCG-TCACCAGCGAGGTTAAG 129
|||| |||||||||||| | ||||| || ||||||| || | || || ||||||||
Sbjct 525 GTGATAGCGTGCCTTTTGTAGAATGAACCGGCGAGTTA--CGATTACATGCAAGGTTAAG 468
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTTGGTGGC 188
| || || ||||| || ||||||||| || || ||||||| |||| ||||
Sbjct 467 T--TGAAGAGACGG-AGCCGCAGCGAAAGCGAGTCTGAATAGGGCGATAGAGTATGTGGT 411
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
||||| ||||||| |||||||||||| | |||| ||||||| |||||| | |||
Sbjct 410 CGTAGACCCGAAACCAGGTGATCTACCCATGTCCAGGGTGAAGTCCAGGTAACACTGGAT 351
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| ||||||| |||||||||||| |||||| | |||||| || ||||
Sbjct 350 GGAGGCCCGAACCCACGCACGTTGAAAAGTGCGGGGATGAGGTGTGGGTAGCGGAGAAAT 291
Query 309 GCCAATCAAACTGGGAAATAGCTCGT 334
|||||| |||| ||| |||||| ||
Sbjct 290 TCCAATCGAACTTGGAGATAGCTGGT 265
>seq3935
Length=1602
Score = 181 bits (200), Expect = 2e-43
Identities = 245/336 (73%), Gaps = 14/336 (4%)
Strand=Plus/Plus
Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63
||||| ||||| |||||| || |||||| | | |||||||||| || |||| |
Sbjct 263 CCCGATGAGGGGAGTGAAACAGTACCTGAAACGGATTGCCTACAAGCAGTTGGAGG---G 319
Query 64 TGATTCGG---TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGC 120
| || | |||| |||| ||| |||||||||| | || || ||| | || | |||
Sbjct 320 TCCTTGAGGCCTGACAGCGTACCTCTTGCATAATGGGTCTGTGACTTAAT-GTTTCAAGC 378
Query 121 GAGGTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG- 178
|| ||||| | || || ||| || || ||||||||| || || ||||||||
Sbjct 379 AAGCTTAAG-----CCGGTAGGTGTAGGCGCAGCGAAAGCGAGTCTGAATAGGGCGACAT 433
Query 179 AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGT 238
|||| | | ||||| ||||||| | |||||| || || |||| ||||| |||||
Sbjct 434 AGTTTGAAGTATTAGACCCGAAACCCGGCGATCTAGGCATGACCAGGATGAAGGTGCGGT 493
Query 239 AACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA 298
||| || |||||| |||||||| | |||||||||||||| ||||||| | | | ||
Sbjct 494 AACACGCACTGGAGGTCCGAACCGATTAACGTTGAAAAGTTACCGGATGAGTTGTGTTTA 553
Query 299 GGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
||||||||||||||||||| | ||||||||||| ||
Sbjct 554 GGGGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGT 589
>seq1923
Length=740
Score = 122 bits (134), Expect = 2e-25
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCT 204
||||| || |||| |||| | || ||||||| ||| | ||| ||||| |||||||
Sbjct 681 AGCCGTAGAGAAATCGAGTCCGAATAGGGCGATCAGTCGCTGGGTGTAGACCCGAAACCA 622
Query 205 TGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGT 264
|||||||| ||| | |||| ||||| || ||||| || |||||| ||||||||
Sbjct 621 AGTGATCTATCCATGGCCAGGATGAAGGTGCCGTAACAGGTACTGGAGGTCCGAACCGAC 562
Query 265 AAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGA 324
| |||| ||| | ||||||| | || |||||||||||||| || |||||| |||
Sbjct 561 TAGTGTTGCAAAACTAGCGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACTTGGA 502
Query 325 AATAGCTCGT 334
||||||| ||
Sbjct 501 AATAGCTGGT 492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972752809472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |