Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq968 178 2e-42 seq4737 159 5e-37 >seq968 Length=3778 Score = 178 bits (196), Expect = 2e-42 Identities = 179/229 (78%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| ||||| | ||| ||| | | |||| ||||||| | | |||||| ||||| Sbjct 678 GTACAAAGAGCAGGAATGTAATCAGCACAAGCT-GATGACTTGTGTCTACTAGACATTTC 736 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 || ||||| | ||| |||||||||| |||||||||| ||| | ||||| | |||||| Sbjct 737 -TCATTGAAAAGCAATAATTGCAATGCTCTATCCCCAGCACAACAGAATTTAACAAGATT 795 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 | || || || || | |||| ||||| ||| | ||| ||||||||| | | | || | Sbjct 796 ATCCAGATCTCTCAGTCAAGATGATATACTTGCTGACCCTATCAGTGTAACACACATGTG 855 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 | ||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 856 GTCCAGAACATCTAAAAGCATCACAGATCTGTTATTGCCTCAAACTTCC 904 >seq4737 Length=1028 Score = 159 bits (176), Expect = 5e-37 Identities = 175/229 (76%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| ||| || ||| | | | |||| ||| ||| | | ||||||| ||||| Sbjct 560 GTACAAAGAACAGAGATGTAATTGGCACAAGCT-GATAACTTGTGTCTACTAGGCATTTC 618 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 | |||||||| ||| |||||||||| |||||| ||| || || |||| | |||||| Sbjct 619 TT-GTTGAAGAGCAATAATTGCAATGCTCTATCTCCAGCATGACAGGATTTAACAAGATT 677 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| || || | || |||| | || ||| | || ||||| |||| | |||| Sbjct 678 ACCCAGATCTCTTGGTCAAGATAATGTACTTGCTGGCCCTGTCAGTATAGCATGTGTGCA 737 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 738 GCCCAGAACATCTAAGAGCATCACAGACCTGTTATTGCCTCAAACTTCC 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751964660465