Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq968 178 2e-42
seq4737 159 5e-37
>seq968
Length=3778
Score = 178 bits (196), Expect = 2e-42
Identities = 179/229 (78%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||| ||||| | ||| ||| | | |||| ||||||| | | |||||| |||||
Sbjct 678 GTACAAAGAGCAGGAATGTAATCAGCACAAGCT-GATGACTTGTGTCTACTAGACATTTC 736
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
|| ||||| | ||| |||||||||| |||||||||| ||| | ||||| | ||||||
Sbjct 737 -TCATTGAAAAGCAATAATTGCAATGCTCTATCCCCAGCACAACAGAATTTAACAAGATT 795
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
| || || || || | |||| ||||| ||| | ||| ||||||||| | | | || |
Sbjct 796 ATCCAGATCTCTCAGTCAAGATGATATACTTGCTGACCCTATCAGTGTAACACACATGTG 855
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
| ||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 856 GTCCAGAACATCTAAAAGCATCACAGATCTGTTATTGCCTCAAACTTCC 904
>seq4737
Length=1028
Score = 159 bits (176), Expect = 5e-37
Identities = 175/229 (76%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||| ||| || ||| | | | |||| ||| ||| | | ||||||| |||||
Sbjct 560 GTACAAAGAACAGAGATGTAATTGGCACAAGCT-GATAACTTGTGTCTACTAGGCATTTC 618
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
| |||||||| ||| |||||||||| |||||| ||| || || |||| | ||||||
Sbjct 619 TT-GTTGAAGAGCAATAATTGCAATGCTCTATCTCCAGCATGACAGGATTTAACAAGATT 677
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| || || | || |||| | || ||| | || ||||| |||| | ||||
Sbjct 678 ACCCAGATCTCTTGGTCAAGATAATGTACTTGCTGGCCCTGTCAGTATAGCATGTGTGCA 737
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 738 GCCCAGAACATCTAAGAGCATCACAGACCTGTTATTGCCTCAAACTTCC 786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751964660465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |