Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq4742 598 2e-168
seq3321 547 3e-153
seq4833 233 8e-59
seq1164 136 2e-29
>seq4742
Length=1451
Score = 598 bits (662), Expect = 2e-168
Identities = 527/656 (80%), Gaps = 1/656 (0%)
Strand=Plus/Plus
Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86
||| ||||| || |||| |||||||||||||||||||| ||| |||| ||||||||||
Sbjct 77 AAGTTCCTTTAACAAGTCAAGTTGTTTGGGAATGCAGCTTTAAGTGGGTGGTAAATTTCA 136
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| | ||
Sbjct 137 TCTAAAGCTAAATATTGGCTGGAGACCAATAGCGCACAAGTAGAGTGATTGAAAGGTTAA 196
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||||| ||| ||||||||||||| |||| |||||||||||||||| ||||| |||||||
Sbjct 197 AAGCATCTTGAAAAGAGAGTTAAATAGCATGTGAAATTGTTGAAAGAGAAGCACTTGCAA 256
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTC-AG 265
||||| | | | ||||| | ||| ||| ||| ||| | | || ||
Sbjct 257 CCAGATTCAGTCTTGGGGGCTCAGCAGGCGTGCGCGCCCGTGTACTTCCCCATGTTCCAG 316
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
||||||||||| || ||| || || ||||| |||| ||||||| | ||| | | ||
Sbjct 317 GCCAGCATCAGTTCTGGCAGTTGGTTAAAGACCCCTGGAATGTATCATCCTCCAGAATGT 376
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
|||||||| | |||| |||| |||| ||| ||||||||| | | || | || ||||
Sbjct 377 CTTATAGCCAGAGGTGTAATGTGGCCAGCCAGGACTGAGGAACACACTTCAGCACAGATG 436
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
||||| ||||| |||||||| ||| |||||| ||||| || |||||||| ||||||| |
Sbjct 437 CTGGCATAATGATTGTAAGCAGCCTGTCTTGAAACACAGATCAAGGAGTTTAACATCCAC 496
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
| |||||| ||||||||||| |||| | | |||||| ||| ||| ||||| ||| |
Sbjct 497 ACAAGTGTTCAGGTGTCAAACCTGTGCATGCAGTGAAAGCAAACAGAGATGGGAGCCCAT 556
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|| |||||||||| ||| ||||||| |||| | |||||||||||||||||| | ||||
Sbjct 557 TAGAGTGCACCATCAACCAATCCTGAAGTCTACAGATGGATTTGAGTAAGAGTGTGGCTG 616
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 617 TTGGGACCCAAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 676
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
| || ||| |||| |||||| ||||||||| || || ||||||||||||| |||
Sbjct 677 GAAGACTCACAGCAGTTCTGATGTGCAAATCAATTGTTGAATTTGGGTATAGAGGC 732
>seq3321
Length=1129
Score = 547 bits (606), Expect = 3e-153
Identities = 503/632 (80%), Gaps = 3/632 (0%)
Strand=Plus/Minus
Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86
||| |||||| || |||| |||||||||||||||||||||||| |||| ||||||||||
Sbjct 632 AAGTTCCTTCAACAAGTCAAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTTCA 573
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
| ||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||| ||
Sbjct 572 TTTAAAGCTAAATATTGGCTGGAGACTGATAGTGCACAAGTAGAGTGATTGAAAGATTAA 513
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
|||||| ||| |||| | |||||| |||| |||||||||||||||| ||||| |||||||
Sbjct 512 AAGCACCTTGAAAAGGGGGTTAAATAGCATGTGAAATTGTTGAAAGAGAAGCACTTGCAA 453
Query 207 CCAGACT-TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTC-A 264
||||| | | | || ||||| | ||| | | | ||| |||| | | ||
Sbjct 452 CCAGATTCAGTCTTGAG-GGCTCAGCAGGCATGTGTGTCTGTGTACTCCCCCATGTTCTG 394
Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324
|||||||||||| || || ||| || ||||| | || ||||||| | || | || |
Sbjct 393 GGCCAGCATCAGTTCTGGTGGTTGGTTAAAGACTCCTGGAATGTATCATTCTCCAGGATG 334
Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGAT 384
| |||||||| |||||| ||||| | | | ||||||| || || | || |||
Sbjct 333 TCTTATAGCCAGGGGTGTAATGCAGTCAGTTGAGACTGAGAAATGCACTTCAGCACAGAT 274
Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444
|||||| ||||| |||||||| ||| |||||| ||||| || |||| ||||||||||| |
Sbjct 273 GCTGGCATAATGATTGTAAGCAGCCTGTCTTGAAACACAGATCAAGAAGTCTAACATCCA 214
Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504
| |||||||||||||||||||| || ||| | |||||| || ||| ||||| |||
Sbjct 213 CACAAGTGTTTGGGTGTCAAACCCATGTGCGCAGTGAAAGCAAATAGAGATGGGAGCCCA 154
Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564
| ||| ||||||||| | | ||||||| |||| | |||||||||||||||||| || ||
Sbjct 153 TTAGGATGCACCATCAATCAATCCTGAAGTCTACAGATGGATTTGAGTAAGAGTATGACT 94
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 93 GTTGGAACCTGAAAGATGGTGAACTATGCCTGAATAGGATGAAGCCAGAGAAAACTCTGA 34
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC 656
|||||||| ||||| |||||| |||||||||
Sbjct 33 TGGAGGCTTGCAGCAGTTCTGATGTGCAAATC 2
>seq4833
Length=1414
Score = 233 bits (258), Expect = 8e-59
Identities = 185/222 (83%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGA 521
|||||| ||| | | | |||||| ||| |||||| || | | | || ||||||||| |
Sbjct 1 CAAACCTGTGTGTGCAGTGAAAGCAAACAGAGGTGAGAGCTCATTAGAGTGCACCATTAA 60
Query 522 CCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGAT 581
| |||||||| |||| | |||| |||||||||||||||| |||||||||| | |||||||
Sbjct 61 CTGATCCTGAAGTCTACAGATGAATTTGAGTAAGAGCATGGCTGTTGGGATCTGAAAGAT 120
Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641
||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||
Sbjct 121 AATGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAACTCTGGTGGAGGCTCACAGCAGT 180
Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| | ||||||| ||| || |||||| ||||||||| ||
Sbjct 181 TCTGACATGCAAATTGATTGTTGAATTTGAGTATAGGGGTGA 222
>seq1164
Length=5114
Score = 136 bits (150), Expect = 2e-29
Identities = 86/93 (92%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79
|| || |||| ||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 1068 CCATGCGAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTA 1127
Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGAC 112
|||||| |||||||||||||||||||| |||||
Sbjct 1128 AATTTCATCTAAAGCTAAATATTGGCCGGAGAC 1160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079895946050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |