Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4742 598 2e-168 seq3321 547 3e-153 seq4833 233 8e-59 seq1164 136 2e-29 >seq4742 Length=1451 Score = 598 bits (662), Expect = 2e-168 Identities = 527/656 (80%), Gaps = 1/656 (0%) Strand=Plus/Plus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||| ||||| || |||| |||||||||||||||||||| ||| |||| |||||||||| Sbjct 77 AAGTTCCTTTAACAAGTCAAGTTGTTTGGGAATGCAGCTTTAAGTGGGTGGTAAATTTCA 136 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| | || Sbjct 137 TCTAAAGCTAAATATTGGCTGGAGACCAATAGCGCACAAGTAGAGTGATTGAAAGGTTAA 196 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||||| ||| ||||||||||||| |||| |||||||||||||||| ||||| ||||||| Sbjct 197 AAGCATCTTGAAAAGAGAGTTAAATAGCATGTGAAATTGTTGAAAGAGAAGCACTTGCAA 256 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTC-AG 265 ||||| | | | ||||| | ||| ||| ||| ||| | | || || Sbjct 257 CCAGATTCAGTCTTGGGGGCTCAGCAGGCGTGCGCGCCCGTGTACTTCCCCATGTTCCAG 316 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 ||||||||||| || ||| || || ||||| |||| ||||||| | ||| | | || Sbjct 317 GCCAGCATCAGTTCTGGCAGTTGGTTAAAGACCCCTGGAATGTATCATCCTCCAGAATGT 376 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| | |||| |||| |||| ||| ||||||||| | | || | || |||| Sbjct 377 CTTATAGCCAGAGGTGTAATGTGGCCAGCCAGGACTGAGGAACACACTTCAGCACAGATG 436 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||| ||||| |||||||| ||| |||||| ||||| || |||||||| ||||||| | Sbjct 437 CTGGCATAATGATTGTAAGCAGCCTGTCTTGAAACACAGATCAAGGAGTTTAACATCCAC 496 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 | |||||| ||||||||||| |||| | | |||||| ||| ||| ||||| ||| | Sbjct 497 ACAAGTGTTCAGGTGTCAAACCTGTGCATGCAGTGAAAGCAAACAGAGATGGGAGCCCAT 556 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 || |||||||||| ||| ||||||| |||| | |||||||||||||||||| | |||| Sbjct 557 TAGAGTGCACCATCAACCAATCCTGAAGTCTACAGATGGATTTGAGTAAGAGTGTGGCTG 616 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 617 TTGGGACCCAAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 676 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 | || ||| |||| |||||| ||||||||| || || ||||||||||||| ||| Sbjct 677 GAAGACTCACAGCAGTTCTGATGTGCAAATCAATTGTTGAATTTGGGTATAGAGGC 732 >seq3321 Length=1129 Score = 547 bits (606), Expect = 3e-153 Identities = 503/632 (80%), Gaps = 3/632 (0%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||| |||||| || |||| |||||||||||||||||||||||| |||| |||||||||| Sbjct 632 AAGTTCCTTCAACAAGTCAAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTTCA 573 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 | ||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||| || Sbjct 572 TTTAAAGCTAAATATTGGCTGGAGACTGATAGTGCACAAGTAGAGTGATTGAAAGATTAA 513 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 |||||| ||| |||| | |||||| |||| |||||||||||||||| ||||| ||||||| Sbjct 512 AAGCACCTTGAAAAGGGGGTTAAATAGCATGTGAAATTGTTGAAAGAGAAGCACTTGCAA 453 Query 207 CCAGACT-TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTC-A 264 ||||| | | | || ||||| | ||| | | | ||| |||| | | || Sbjct 452 CCAGATTCAGTCTTGAG-GGCTCAGCAGGCATGTGTGTCTGTGTACTCCCCCATGTTCTG 394 Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324 |||||||||||| || || ||| || ||||| | || ||||||| | || | || | Sbjct 393 GGCCAGCATCAGTTCTGGTGGTTGGTTAAAGACTCCTGGAATGTATCATTCTCCAGGATG 334 Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGAT 384 | |||||||| |||||| ||||| | | | ||||||| || || | || ||| Sbjct 333 TCTTATAGCCAGGGGTGTAATGCAGTCAGTTGAGACTGAGAAATGCACTTCAGCACAGAT 274 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||| ||||| |||||||| ||| |||||| ||||| || |||| ||||||||||| | Sbjct 273 GCTGGCATAATGATTGTAAGCAGCCTGTCTTGAAACACAGATCAAGAAGTCTAACATCCA 214 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 | |||||||||||||||||||| || ||| | |||||| || ||| ||||| ||| Sbjct 213 CACAAGTGTTTGGGTGTCAAACCCATGTGCGCAGTGAAAGCAAATAGAGATGGGAGCCCA 154 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | ||| ||||||||| | | ||||||| |||| | |||||||||||||||||| || || Sbjct 153 TTAGGATGCACCATCAATCAATCCTGAAGTCTACAGATGGATTTGAGTAAGAGTATGACT 94 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 93 GTTGGAACCTGAAAGATGGTGAACTATGCCTGAATAGGATGAAGCCAGAGAAAACTCTGA 34 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC 656 |||||||| ||||| |||||| ||||||||| Sbjct 33 TGGAGGCTTGCAGCAGTTCTGATGTGCAAATC 2 >seq4833 Length=1414 Score = 233 bits (258), Expect = 8e-59 Identities = 185/222 (83%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGA 521 |||||| ||| | | | |||||| ||| |||||| || | | | || ||||||||| | Sbjct 1 CAAACCTGTGTGTGCAGTGAAAGCAAACAGAGGTGAGAGCTCATTAGAGTGCACCATTAA 60 Query 522 CCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGAT 581 | |||||||| |||| | |||| |||||||||||||||| |||||||||| | ||||||| Sbjct 61 CTGATCCTGAAGTCTACAGATGAATTTGAGTAAGAGCATGGCTGTTGGGATCTGAAAGAT 120 Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| || Sbjct 121 AATGAACTATGCCTGAATAGGGTGAAGTCAGAGGAAACTCTGGTGGAGGCTCACAGCAGT 180 Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| | ||||||| ||| || |||||| ||||||||| || Sbjct 181 TCTGACATGCAAATTGATTGTTGAATTTGAGTATAGGGGTGA 222 >seq1164 Length=5114 Score = 136 bits (150), Expect = 2e-29 Identities = 86/93 (92%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 || || |||| ||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 1068 CCATGCGAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTA 1127 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGAC 112 |||||| |||||||||||||||||||| ||||| Sbjct 1128 AATTTCATCTAAAGCTAAATATTGGCCGGAGAC 1160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079895946050