Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 104 2e-20
seq1245 80.6 3e-13
>seq1052
Length=704
Score = 104 bits (114), Expect = 2e-20
Identities = 136/183 (74%), Gaps = 14/183 (8%)
Strand=Plus/Minus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| | |||||| ||||||||||||| |||||| ||||| ||||
Sbjct 206 GGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 147
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC-------GATAT 119
|| ||||| ||| | |||||||| |||| ||||||||||| ||||| | |
Sbjct 146 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACCCTTAGGGGT 87
Query 120 ATTGGA-GAT-ATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAA 177
|| | | ||| | ||||| | | ||| |||||||| || |||||||||||||| |
Sbjct 86 ATCGCATGATGAATTCATA--GTCATGCG--AGGCGAACCGGGTGAACTGAAACATCTCA 31
Query 178 GTA 180
|||
Sbjct 30 GTA 28
>seq1245
Length=1300
Score = 80.6 bits (88), Expect = 3e-13
Identities = 83/109 (76%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
||||||||||||| ||| || |||| ||| |||||||| || | | ||| | ||| ||
Sbjct 1101 ACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACTAACACCGATATGCTTCG 1042
Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|||| | | || | |||||||| |||| ||||||||||| |||||
Sbjct 1041 GGGAGCTGTAAGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC 993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476777593231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |