Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1052 104 2e-20 seq1245 80.6 3e-13 >seq1052 Length=704 Score = 104 bits (114), Expect = 2e-20 Identities = 136/183 (74%), Gaps = 14/183 (8%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| |||||| ||||| |||| Sbjct 206 GGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATAAGCTTCGGG 147 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC-------GATAT 119 || ||||| ||| | |||||||| |||| ||||||||||| ||||| | | Sbjct 146 GAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACCCTTAGGGGT 87 Query 120 ATTGGA-GAT-ATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAA 177 || | | ||| | ||||| | | ||| |||||||| || |||||||||||||| | Sbjct 86 ATCGCATGATGAATTCATA--GTCATGCG--AGGCGAACCGGGTGAACTGAAACATCTCA 31 Query 178 GTA 180 ||| Sbjct 30 GTA 28 >seq1245 Length=1300 Score = 80.6 bits (88), Expect = 3e-13 Identities = 83/109 (76%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||||||| ||| || |||| ||| |||||||| || | | ||| | ||| || Sbjct 1101 ACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACTAACACCGATATGCTTCG 1042 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 |||| | | || | |||||||| |||| ||||||||||| ||||| Sbjct 1041 GGGAGCTGTAAGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC 993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476777593231