Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq3935 149 9e-34
seq3495 84.2 3e-14
seq132 77.0 5e-12
>seq3935
Length=1602
Score = 149 bits (164), Expect = 9e-34
Identities = 186/251 (74%), Gaps = 13/251 (5%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTA---CCGTCTTCG 57
|||| ||||| ||||||||||||||||| || ||||| ||| ||| ||| ||| |
Sbjct 1521 CTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGACTTAG 1462
Query 58 CACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC 117
|| | ||||||||||| |||||||||||| ||| || || ||| || || |||
Sbjct 1461 CAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC--CCCCCGACAG- 1405
Query 118 TCAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
| | | || ||| | ||| | |||||| |||||| ||||| | || ||||||
Sbjct 1404 --AGCTTGCGCTT----AGCCGGGGC-CTCCTTCTTCCGAAGGTACGGAGGCAATTTGCC 1352
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237
|| |||||| | ||| ||| | | | |||||| |||| |||||||||||||||||||||
Sbjct 1351 GAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCACCTGTGTC 1292
Query 238 GGTTTACGGTA 248
||||| ||||
Sbjct 1291 GGTTTCGGGTA 1281
>seq3495
Length=1081
Score = 84.2 bits (92), Expect = 3e-14
Identities = 78/98 (80%), Gaps = 1/98 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | || |||||||| |||||||| | |||||
Sbjct 965 TGGCCCTCCTTATCCCGAAGTTACGGTAGTCAATTTGCCGAGTTCCTTAAGGATTGTTCA 1024
Query 199 CCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236
| | |||||||| ||||||||||| || || |||||
Sbjct 1025 CTCAAACGCCTTTGTATTCTCTACTTGCTTACTTGTGT 1062
>seq132
Length=602
Score = 77.0 bits (84), Expect = 5e-12
Identities = 65/80 (81%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 169 CATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACC 228
||||||||||| ||||||||| | ||||| | || | |||||| ||||||| | | |
Sbjct 3 CATTTTGCCGAGTTCCTTAACGAGAGTTCTCTCGCTCACCTTAGGATTCTCTCCTCGCCT 62
Query 229 ACCTGTGTCGGTTTACGGTA 248
|||||||||||||| |||||
Sbjct 63 ACCTGTGTCGGTTTGCGGTA 82
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694367367323
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |