Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq3935 154 4e-35 seq3495 147 6e-33 >seq3935 Length=1602 Score = 154 bits (170), Expect = 4e-35 Identities = 215/302 (71%), Gaps = 27/302 (9%) Strand=Plus/Minus Query 129 GTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCC 188 ||||| ||||||||||||||||||| ||||||| || ||||||| || || Sbjct 1577 GTTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCAGAGCTT-------GCACTCCT 1525 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT----TCGT 244 | || ||||||||| |||||||||||||||||| ||||||||||| ||| || Sbjct 1524 CCTC--TTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGA 1467 Query 245 GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA 304 || |||||| |||||||||| ||||||||||| | ||||| | | | || | Sbjct 1466 CTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCCGAC 1407 Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364 |||||| || ||| | | || | |||||| |||||| ||||| | Sbjct 1406 AGAGCTTGCG---------CTTAGC-----CGGGGCCTCCTTCTTCCGAAGGTACGGAGG 1361 Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACC 424 | |||||| ||||||||| | ||||||||||||||||||||| ||||||| ||| Sbjct 1360 CAATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACC 1301 Query 425 AC 426 || Sbjct 1300 AC 1299 >seq3495 Length=1081 Score = 147 bits (162), Expect = 6e-33 Identities = 195/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| || ||||||||||||||||| | | |||||||| |||||| Sbjct 617 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCCTCGAGACAGCTGTTGTATCGTT 676 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 | | ||||| |||||| | | | ||| | | ||||||||||||||||||||||||| ||| Sbjct 677 AAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAGGACCCTTA 736 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT-AGCTAACCCCAT 191 | | || ||||||| || | ||||| || |||| | || || | ||| || Sbjct 737 TAGGTAAGGCCGCCATTAATCGGGGTATCCTTCAAAACCTAATTTTTCAATTAAGTAAAT 796 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT-TTCGTGTTTGC 250 ||| || ||| || |||||| | |||||| | |||| | | | || | ||||| Sbjct 797 TCGTTACCCAGCCGACATTGGGCAGACATCACACTCAATACTTTGATTATTAATCTTTGC 856 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||||||| |||||||| |||||||||| Sbjct 857 AGAGTGCTTTGTTTTTATTAAACAGTCG 884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260738838592