Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq3935 154 4e-35
seq3495 147 6e-33
>seq3935
Length=1602
Score = 154 bits (170), Expect = 4e-35
Identities = 215/302 (71%), Gaps = 27/302 (9%)
Strand=Plus/Minus
Query 129 GTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCC 188
||||| ||||||||||||||||||| ||||||| || ||||||| || ||
Sbjct 1577 GTTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCAGAGCTT-------GCACTCCT 1525
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT----TCGT 244
| || ||||||||| |||||||||||||||||| ||||||||||| ||| ||
Sbjct 1524 CCTC--TTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGA 1467
Query 245 GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA 304
|| |||||| |||||||||| ||||||||||| | ||||| | | | || |
Sbjct 1466 CTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCCGAC 1407
Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364
|||||| || ||| | | || | |||||| |||||| ||||| |
Sbjct 1406 AGAGCTTGCG---------CTTAGC-----CGGGGCCTCCTTCTTCCGAAGGTACGGAGG 1361
Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACC 424
| |||||| ||||||||| | ||||||||||||||||||||| ||||||| |||
Sbjct 1360 CAATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACC 1301
Query 425 AC 426
||
Sbjct 1300 AC 1299
>seq3495
Length=1081
Score = 147 bits (162), Expect = 6e-33
Identities = 195/268 (73%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||| || ||||||||||||||||| | | |||||||| ||||||
Sbjct 617 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCCTCGAGACAGCTGTTGTATCGTT 676
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
| | ||||| |||||| | | | ||| | | ||||||||||||||||||||||||| |||
Sbjct 677 AAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAGGACCCTTA 736
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT-AGCTAACCCCAT 191
| | || ||||||| || | ||||| || |||| | || || | ||| ||
Sbjct 737 TAGGTAAGGCCGCCATTAATCGGGGTATCCTTCAAAACCTAATTTTTCAATTAAGTAAAT 796
Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT-TTCGTGTTTGC 250
||| || ||| || |||||| | |||||| | |||| | | | || | |||||
Sbjct 797 TCGTTACCCAGCCGACATTGGGCAGACATCACACTCAATACTTTGATTATTAATCTTTGC 856
Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278
|||||||| |||||||| ||||||||||
Sbjct 857 AGAGTGCTTTGTTTTTATTAAACAGTCG 884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260738838592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |