Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq3935 152 1e-34 seq3495 100 6e-19 >seq3935 Length=1602 Score = 152 bits (168), Expect = 1e-34 Identities = 188/257 (73%), Gaps = 24/257 (9%) Strand=Plus/Minus Query 123 GTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAG 182 |||||||||||||||||||||||| |||||| | |||| |||| | | ||| Sbjct 1577 GTTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCAGAGCTTGCACTCCTC------ 1524 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG----CGA 238 | |||||||||| |||||||||||||||||| ||||||| |||||||| ||| Sbjct 1523 ---CTCTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGA 1467 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT-----TGGGCCTATTCTCTGCG-- 291 ||||||||| |||||||||||| |||||||||||| ||||| | | | || Sbjct 1466 CTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCCGAC 1407 Query 292 ---GCCTG-TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTT 347 || || | ||| | || | |||||| || ||| ||||| | || ||||||||||| Sbjct 1406 AGAGCTTGCGCTTAGCCGGGGCCTCCTTCTTCCGAAGGTACGGAGGCAATTTGCCGAGTT 1347 Query 348 CCTTAACAATAGTTCTC 364 |||| | | | ||||| Sbjct 1346 CCTTCAGGACACTTCTC 1330 >seq3495 Length=1081 Score = 100 bits (110), Expect = 6e-19 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | ||| ||||||||| ||| | || | ||||||| |||||| Sbjct 617 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCCTCGAGACAGCTGTTGTATCGTT 676 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 | | | ||| ||| || | | | ||| | | ||||||||||||||||||||||||| ||| Sbjct 677 AAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAGGACCCTTA 736 Query 127 TAGTTACGGCCGCCGTTTACTGGGG 151 ||| || ||||||| || | |||| Sbjct 737 TAGGTAAGGCCGCCATTAATCGGGG 761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062348462976