Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq3935 152 1e-34
seq3495 100 6e-19
>seq3935
Length=1602
Score = 152 bits (168), Expect = 1e-34
Identities = 188/257 (73%), Gaps = 24/257 (9%)
Strand=Plus/Minus
Query 123 GTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAG 182
|||||||||||||||||||||||| |||||| | |||| |||| | | |||
Sbjct 1577 GTTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCAGAGCTTGCACTCCTC------ 1524
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG----CGA 238
| |||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct 1523 ---CTCTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGA 1467
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT-----TGGGCCTATTCTCTGCG-- 291
||||||||| |||||||||||| |||||||||||| ||||| | | | ||
Sbjct 1466 CTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCCGAC 1407
Query 292 ---GCCTG-TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTT 347
|| || | ||| | || | |||||| || ||| ||||| | || |||||||||||
Sbjct 1406 AGAGCTTGCGCTTAGCCGGGGCCTCCTTCTTCCGAAGGTACGGAGGCAATTTGCCGAGTT 1347
Query 348 CCTTAACAATAGTTCTC 364
|||| | | | |||||
Sbjct 1346 CCTTCAGGACACTTCTC 1330
>seq3495
Length=1081
Score = 100 bits (110), Expect = 6e-19
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | ||| ||||||||| ||| | || | ||||||| ||||||
Sbjct 617 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCCTCGAGACAGCTGTTGTATCGTT 676
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
| | | ||| ||| || | | | ||| | | ||||||||||||||||||||||||| |||
Sbjct 677 AAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAGGACCCTTA 736
Query 127 TAGTTACGGCCGCCGTTTACTGGGG 151
||| || ||||||| || | ||||
Sbjct 737 TAGGTAAGGCCGCCATTAATCGGGG 761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062348462976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |