Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4737 295 1e-77 seq968 273 3e-71 >seq4737 Length=1028 Score = 295 bits (326), Expect = 1e-77 Identities = 221/258 (86%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | |||| | |||||| |||| | |||| |||||||||||||||| ||||||||| Sbjct 704 TACTTGCTGGCCCTGTCAGTATAGCATGTGTGCAGCCCAGAACATCTAAGAGCATCACAG 763 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct 764 ACCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCTGATAGTCCCTCTAAGAAGCCAGC 822 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || | ||| | |||||||||||||||||||| ||| ||| |||||| ||||| Sbjct 823 AGCCCACAAAAGTAGGCTGGGCTATTTAGCAGGTTAAGATCTTGTTTGTTATCACAATTA 882 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | |||| ||||||||||||||||||||||| |||||||||||||| || | ||||||| Sbjct 883 AGCAGATAAATCACTCCACCAACTAAGAACAGCCATGCACCACCATTCAAAAGATCAAGA 942 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 943 AAGAGCTCTCAATCTGTC 960 >seq968 Length=3778 Score = 273 bits (302), Expect = 3e-71 Identities = 207/243 (85%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||| | | | || || ||||||||||||| |||||||||| ||||||||||||| Sbjct 837 TCAGTGTAACACACATGTGGTCCAGAACATCTAAAAGCATCACAGATCTGTTATTGCCTC 896 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135 ||||||||||||||| || |||||||||| ||||||||||||||| | || | ||| Sbjct 897 AAACTTCCATTGGCTTGA-GCCAATAGTCTCTCTAAGAAGCCAGCAGCTCACAAAAGTGA 955 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||||||||||||| ||||||||| |||| |||| | |||||| ||||||||||||| Sbjct 956 GCCAGGCTATTTAGCAGATTAAGGTCTTGTTCATTATTGCAATTAAGCAGACAAATCACT 1015 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 ||||||||||||||| |||||||||||||| ||| | |||||||||| |||| ||||||| Sbjct 1016 CCACCAACTAAGAACAGCCATGCACCACCATCCAAAAAATCAAGAAAAAGCTCTCAATCT 1075 Query 256 GTC 258 ||| Sbjct 1076 GTC 1078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796762555131