Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq4825 379 3e-103
seq4643 192 1e-46
seq4072 78.8 2e-12
>seq4825
Length=1728
Score = 379 bits (420), Expect = 3e-103
Identities = 261/295 (88%), Gaps = 0/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||| ||||||| ||| ||| | ||||||||||||||||||||||||||||||
Sbjct 1026 TACTAAATTGAATTACTGTTGTGGCAATCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 967
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 966 TGACAGTCTAAATCCAGCTCATGTTCCCTATTAGTGGGTGAACAATCCAACACTTACTGA 907
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||| || ||| ||| ||||||||| || | |||||
Sbjct 906 ATTCTGCTTCAGTATGATAGGAAGAGCTGATATCAAAGAATCAAAAAGTAATATTGCTAT 847
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||| ||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 846 GAATGCTTGACTGTCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCATCTCTAGCCT 787
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||| |||| ||||||| || ||||||||||||||||||| ||| |||||||
Sbjct 786 CAAATTTTGAGGAACTAAAGAATTGATAGGCCACACTTTCATGATTTATATTCAC 732
>seq4643
Length=364968
Score = 192 bits (212), Expect = 1e-46
Identities = 127/141 (90%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||| ||||| || ||| |||||| ||||||||||||||||||||||||||||||
Sbjct 152261 TACTAAATTGAATTGCCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 152320
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 152321 CGACAGTCTAAACCCAGCTCGCGTTCCCTATTAGTGGGTGAACAATCCAACACTTACTGA 152380
Query 121 ATTCTGCTTCGGTATGATAGG 141
||||||||| |||||||||||
Sbjct 152381 ATTCTGCTTTGGTATGATAGG 152401
>seq4072
Length=753
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct 667 TACTAAATTGAATTACCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 726
Query 61 TGACGG 66
|| ||
Sbjct 727 CGAGGG 732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854358553056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |