Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4825 379 3e-103 seq4643 192 1e-46 seq4072 78.8 2e-12 >seq4825 Length=1728 Score = 379 bits (420), Expect = 3e-103 Identities = 261/295 (88%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| ||||||| ||| ||| | |||||||||||||||||||||||||||||| Sbjct 1026 TACTAAATTGAATTACTGTTGTGGCAATCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 967 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||| || Sbjct 966 TGACAGTCTAAATCCAGCTCATGTTCCCTATTAGTGGGTGAACAATCCAACACTTACTGA 907 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||| || ||| ||| ||||||||| || | ||||| Sbjct 906 ATTCTGCTTCAGTATGATAGGAAGAGCTGATATCAAAGAATCAAAAAGTAATATTGCTAT 847 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||| ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 846 GAATGCTTGACTGTCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCATCTCTAGCCT 787 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||| ||||||| || ||||||||||||||||||| ||| ||||||| Sbjct 786 CAAATTTTGAGGAACTAAAGAATTGATAGGCCACACTTTCATGATTTATATTCAC 732 >seq4643 Length=364968 Score = 192 bits (212), Expect = 1e-46 Identities = 127/141 (90%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| ||||| || ||| |||||| |||||||||||||||||||||||||||||| Sbjct 152261 TACTAAATTGAATTGCCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 152320 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 152321 CGACAGTCTAAACCCAGCTCGCGTTCCCTATTAGTGGGTGAACAATCCAACACTTACTGA 152380 Query 121 ATTCTGCTTCGGTATGATAGG 141 ||||||||| ||||||||||| Sbjct 152381 ATTCTGCTTTGGTATGATAGG 152401 >seq4072 Length=753 Score = 78.8 bits (86), Expect = 2e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| |||||||| ||| |||||| |||||||||||||||||||||||||||||| Sbjct 667 TACTAAATTGAATTACCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 726 Query 61 TGACGG 66 || || Sbjct 727 CGAGGG 732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854358553056