Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq1245 329 1e-87
seq3935 280 5e-73
seq1923 221 4e-55
>seq1245
Length=1300
Score = 329 bits (364), Expect = 1e-87
Identities = 438/601 (73%), Gaps = 23/601 (4%)
Strand=Plus/Plus
Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62
||||||||| |||| || | |||||||| || || | | | | ||||||||||
Sbjct 105 GACTACGGATCTTA-TCACTCGCAGTCTGACTCCCAAGGA-TAAGTATTTGGCATTCGGA 162
Query 63 GTTTGGTTGATTTCGGTAAGCTTGTGGGC-CCCCTAGACCATCCAGTGCTCTACCTCCGG 121
||||| ||| |||||||| | |||| ||||||| ||| |||||||||||||||
Sbjct 163 GTTTGTCTGAATTCGGTAACCCGATGGGGGCCCCTAGTCCAAACAGTGCTCTACCTCC-- 220
Query 122 GAAGAAACACGC---GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAA 178
|| | | | || ||| |||||| ||||||| |||||||||||||| | ||
Sbjct 221 -AATACTCTTACCTTGAGGCTAGCCCTAAAGCTATTTCGGAGAGAACCAGCTATCTCCAA 279
Query 179 GTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGG 238
||| |||||| |||| || ||| ||||| |||||||| || |||||||| | |||||
Sbjct 280 GTTCGATTGGAATTTCTCCGCTACCCACACCTCATCCCCGCACTTTTCAACGTGCGTGGG 339
Query 239 TTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCT 298
||||| |||||| | || ||||| | ||||| |||| ||||| |||||||| | | |
Sbjct 340 TTCGGGCCTCCATCCAGTGTTACCTGGACTTCACCCTGGACATGGGTAGATCACCTGGTT 399
Query 299 TCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCC 358
|||||||| | |||| |||||||||| |||||||||||||| ||||| |
Sbjct 400 TCGGGTCTACGACCACATACTCTATCGCCCTATTCAGACTCGCTTTCGCTGCGGCTCCGT 459
Query 359 CAC-ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417
| | | ||||||| || | || ||||||| || ||||||| |||||||||||
Sbjct 460 CTCTTCAACTTAACCTTGC-ATGTAATCGTAACTCGCCGGTTCATTCTACAAAAGGCACG 518
Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477
| ||||| | | || || |||| || ||||||||||| ||||||||
Sbjct 519 CTATCACC-----CATTAATGG-------GCTCTAACTACTTGTAGGCACACGGTTTCAG 566
Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537
| |||||||||||||| | ||||| ||||||||||||||||||||||||| || | ||
Sbjct 567 GATCTATTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACT 626
Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597
||||||||| | ||||||||||| ||| | |||||| || | ||| ||| ||||
Sbjct 627 ATCGGTCACTAGGGAGTATTTAGCCTTGGGAGATGGTCCTCCCTGCTTCCGACGGGATTT 686
Query 598 C 598
|
Sbjct 687 C 687
>seq3935
Length=1602
Score = 280 bits (310), Expect = 5e-73
Identities = 424/591 (72%), Gaps = 19/591 (3%)
Strand=Plus/Minus
Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62
||| ||||| |||| | ||||| |||| | ||| | | ||||| | || |||||||
Sbjct 748 GACGACGGACCTTAG-CACCCGCCGTCTGTCTCCCG-GATATCACTCCTAGGTATTCGGA 691
Query 63 GTTTGGTT-GATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120
|||||||| || || |||| | || | | |||| | ||||||||||||||||| ||
Sbjct 690 GTTTGGTTAGAGTT-GGTAGATCTCGCGACCCCCGCAT-CCATCCAGTGCTCTACCCCCT 633
Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180
| || ||| || |||| ||| ||||| |||||||||||||| | |
Sbjct 632 AGGGTGTCCATCCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGC 573
Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240
||||||||||||||||||||| |||| |||||| | | |||||||| | | | ||||
Sbjct 572 TTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTT 513
Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300
||| |||||| || ||||| ||||| |||| |||| |||||| | | |||
Sbjct 512 CGGACCTCCAGTGCGTGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTC 453
Query 301 GGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCA 360
|||||| | | ||| |||||||||| |||||||||||||| || |||| ||
Sbjct 452 GGGTCTAATACTTCAAACTATGTCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCT 393
Query 361 CACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCG 420
||| |||| || || | ||| || || ||| | |||| | ||| ||| |||| |
Sbjct 392 ACCGGCTTAAGCTTGCTTGA-AACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTG 334
Query 421 TCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTA 480
||| || ||| || | | |||| || | ||||||||| ||||||||||
Sbjct 333 TCA---GG--CCTCAAGGAC------CCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTA 285
Query 481 CTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTAT 539
|| ||||||||||| | ||||| ||||||||||||||||||||||||| || ||||||
Sbjct 284 CTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCGCTAT 225
Query 540 CGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590
|||||| | |||||||||||||| |||||||||| ||| |||| ||
Sbjct 224 CGGTCATGTACGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGAC 174
>seq1923
Length=740
Score = 221 bits (244), Expect = 4e-55
Identities = 273/364 (75%), Gaps = 7/364 (2%)
Strand=Plus/Plus
Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGC 110
||| |||||||||||| | || |||||| | | |||||||| | | ||||||
Sbjct 380 CGGTATTCGGAGTTTGCATAGGTTTGGTAAGTCGCCATGACCCCCTAGCCTAAACAGTGC 439
Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170
|||||| ||| | | || || || || |||||||| |||||| |||||||||||
Sbjct 440 TCTACCCCCGC-AGGTAATACTTGAGGCACTACCTAAATAGTTTTCGGAGAGAACCAGCT 498
Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT-CAAC 229
|| | ||||||| || ||||||||||||||||||||| |||||| || |||||| ||||
Sbjct 499 ATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCGCT-AGTTTTGCAAC 557
Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289
||| ||||||| |||||| | |||| ||||| |||| ||||||||||||
Sbjct 558 ACTAGTCGGTTCGGACCTCCAGTACCTGTTACGGCACCTTCATCCTGGCCATGGATAGAT 617
Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349
||||| | ||||||||| | | || ||| || ||||||||||||||||| |||| |||
Sbjct 618 CACTTGGTTTCGGGTCTACACCCAGCGACTGAT-CGCCCTATTCGGACTCGATTTCTCTA 676
Query 350 CGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAA 409
||||| ||| | | ||||||||| || || || | || |||| | | |||| | |||
Sbjct 677 CGGCTTCCCTATTC-GGTTAACCTTGCCACTGAATG-TAAGTCGCTGACCCATTATACAA 734
Query 410 AAGG 413
||||
Sbjct 735 AAGG 738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817511828224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |