Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq3935 289 7e-76
seq1245 248 2e-63
seq1923 183 8e-44
>seq3935
Length=1602
Score = 289 bits (320), Expect = 7e-76
Identities = 325/416 (78%), Gaps = 18/416 (4%)
Strand=Plus/Minus
Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69
|||| |||| ||| |||||||| ||||| || ||||||||| |||||||| || ||||
Sbjct 549 CACAACTCAT-CCGGTAACTTTT-CAACGTTAATCGGTTCGGACCTCCAGTGCGT-GTTA 493
Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCC-CAGC 128
|| ||||| || |||| ||| | ||||||||| ||||| |||||||| | | ||
Sbjct 492 CCGCACCTT-CATCCTGGTCAT-GCCTAGATCGCCGGGTTT-CGGGTCTAATACTTCAA- 437
Query 129 GACTA-GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186
|||| | ||||||| | ||||||||||| |||| ||||| | |||| | ||||||||
Sbjct 436 -ACTATGTCGCCCTATTCAGACTCGCTTT-CGCTGCGCCTACACCTACCGGCTTAAGCTT 379
Query 187 TGCCACTGAAAA--TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244
|| ||||| |||||| | |||||||||| ||| |||||||| |||| | |||
Sbjct 378 -GCT--TGAAACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAG 322
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
| |||| |||||||||| ||| | |||||||| || ||||||||||||| ||||
Sbjct 321 GACC-CTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGG 263
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||||||||||||||||| |||||||||| | |||||||||
Sbjct 262 GTGCTTTTCACCTTTCCCTCACGGTACTAGTTCGCTATCGGTCATGTACGAGTATTTAGG 203
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|||||||| |||||||||||| |||||||| || | |||| ||| ||||||||
Sbjct 202 CTTGGAGGGTGGTCCCCCCATGTTCAGACAGGATTACACGTGTCCCGCCCTACTCG 147
>seq1245
Length=1300
Score = 248 bits (274), Expect = 2e-63
Identities = 298/392 (76%), Gaps = 11/392 (3%)
Strand=Plus/Plus
Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89
||||||||| || ||||||| |||||| ||| |||||| ||| || |||| |
Sbjct 323 TTTTCAACGTGCGTGGGTTCGGGCCTCCATCCAGT-GTTACCTGGACTT-CACCCTGGAC 380
Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGA 148
|| || |||||| || ||||| |||||||| || | ||| | ||||||| | |||
Sbjct 381 ATGGG-TAGATCACCTGGTTT-CGGGTCTACGACC-ACATACTCTATCGCCCTATTCAGA 437
Query 149 CTCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCT 207
|||||||| |||| || |||| || ||| | | | |||| | | ||| ||||
Sbjct 438 CTCGCTTT-CGCTGCGGCTCCGTCTCTTCAACTTAACCTTGCATGTAATCGTAACTCGCC 496
Query 208 GACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGC 267
| |||| ||||||||| |||| ||||||| || ||||||| ||| |||||| ||
Sbjct 497 GGTTCATTCTACAAAAGGCACGCTATCACCCATTAA--TGGGCTCTAACTACTTGTAGGC 554
Query 268 ATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACG 327
| |||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||
Sbjct 555 ACACGGTTTCAGGATCTATTTCACTCCCCT-TCCGGGGTGCTTTTCACCTTTCCCTCACG 613
Query 328 GTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATAT 387
||||| ||||||||||||||| | | ||||||||||||||| |||||||| ||| |
Sbjct 614 GTACTGGTTCACTATCGGTCACTAGGGAGTATTTAGCCTTGGGAGATGGTCCTCCCTGCT 673
Query 388 TCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
|| ||| ||||||||| ||| | |||||
Sbjct 674 TCCGACGGGATTTCTCGTGTCCCGCCGTACTC 705
>seq1923
Length=740
Score = 183 bits (202), Expect = 8e-44
Identities = 182/224 (81%), Gaps = 9/224 (4%)
Strand=Plus/Plus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| |||||||| |||| |||||| |||| |||| |||||||||||| ||||||||
Sbjct 526 CCTATCCACAGCTCAT-CCGCTAG-TTTTGCAACACTAGTCGGTTCGGACCTCCAGTACC 583
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| ||||| ||||| || |||| |||| ||||||||| | ||||| |||||||| |
Sbjct 584 T-GTTACGGCACCTT-CATCCTGGCCAT-GGATAGATCACTTGGTTT-CGGGTCTACA-C 638
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183
||||||||| ||||||| | |||||| ||| | ||||| || ||||||||||||||
Sbjct 639 CCAGCGACTGATCGCCCTATTCGGACTCGATTT-CTCTACGGCTTCCCTATTCGGTTAAC 697
Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTA 227
||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 698 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTA 740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241539769984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |