Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq852 143 6e-32 >seq852 Length=4630 Score = 143 bits (158), Expect = 6e-32 Identities = 150/194 (77%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||| |||| || |||||||||| |||||||||||| || |||||| ||||| | Sbjct 2390 CGATGGTGAGCAGGTCCCCGCCCACCTCGGTCCACGCCAGCCCGACGACCTGGCCGACCT 2449 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | | |||||||||||| |||||||| |||| ||||||||||||||||| | | ||| Sbjct 2450 GGTTCTGCTGCTCGGCGCGGCCGTAGGTGAACTTGCGCACGCCGAGGAATTCATTGAGGT 2509 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGC--GTTTTTCCAGCGCA--TGTTCCTTGACCGCC 176 ||||| |||||| ||||| || || || ||| | | | | |||||||| || Sbjct 2510 TCTCGGCGGTGACCGTCACC-AGCGGCTTGTACTTCTTGAGGAGCAGCCCCTTGACCACC 2568 Query 177 TTGCGGCAGATCTT 190 |||||||||||||| Sbjct 2569 TTGCGGCAGATCTT 2582 Score = 107 bits (118), Expect = 4e-21 Identities = 91/110 (83%), Gaps = 4/110 (4%) Strand=Plus/Plus Query 287 CTTCAGGCCATTG--GCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATC 344 ||||| ||| ||| ||| | ||||||||||| |||||||| | |||||||||| || Sbjct 2828 CTTCACGCCGTTGTTGCCCA--TCTGCTTGGGCAACAGGTACTTCAGGGCGATGTTGGTC 2885 Query 345 TTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| |||||||| || | ||||| |||||||||||||||||||| Sbjct 2886 TTCTCGTCCTCGGTGTAGCCGGAGAGGCGGATCACTTCCATCCGGTCCAG 2935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158343806016