Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3935 203 8e-50 seq1923 145 2e-32 seq132 129 1e-27 seq1245 118 2e-24 >seq3935 Length=1602 Score = 203 bits (224), Expect = 8e-50 Identities = 294/412 (71%), Gaps = 21/412 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||| || |||| |||| |||||| ||| ||||||| | || || | | | | Sbjct 1158 CGACTACCCCCTTCGGGCTCGTCTTAGGGGCCGGCTCACCCTGCGCGGATTAGCCTTGCG 1099 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 | ||||||||||| |||||| | ||| || ||||| | | ||||||||||| || Sbjct 1098 CAGGAACCCTTGGTCTTTCGGCGAAAGGGCATCTCACCCTTTTTATCGCTACTCATGTCT 1039 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACG 178 |||||| |||| | | ||||||||| || | ||| | ||||| | || || Sbjct 1038 GCATTCGCACTTCCGATACCTCCACCACCCATT-ACCAGATGGCTTCGCAGGCTTACGGA 980 Query 179 ACGCTCCCCTACCC---------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTA 229 ||||||| ||||| ||| ||||| || |||||||| | | ||| Sbjct 979 ACGCTCCGCTACCGCGTGTAGTAAACTACACAC----CCTAAGCTTCGGTGCACGTCTTG 924 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTG-----ACCAGTGAGCTATTACGCACTC 284 ||||||| ||||| ||| ||| | | | |||| ||||||||||| |||||| || Sbjct 923 AGCCCCGTTACATCTTCGCCGCAGGAACCCTTGTTTAGACCAGTGAGCTGTTACGCTTTC 864 Query 285 TTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTT 344 ||| ||||||||||||||| ||||||||||||||||||| | | | |||||| |||| Sbjct 863 TTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCACATGCTTT 804 Query 345 CCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 |||||| || | |||| ||| ||||||||| | || ||||||||||||| Sbjct 803 CCCACTTAGACGTGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCT 752 >seq1923 Length=740 Score = 145 bits (160), Expect = 2e-32 Identities = 237/331 (72%), Gaps = 18/331 (5%) Strand=Plus/Plus Query 79 CGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCCTGCATTCTCACT-CGCATC 136 ||||| |||| || |||||| | |||||||||||||| |||||| |||| | || Sbjct 7 CGGCGAGCGGGCTTTTCACCCGCTTTAACGCTACTCATGCCAGCATTCGCACTTCTGAT- 65 Query 137 AACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGACGCTCCCCTACC-CAA 194 | ||||| || | || | | || |||||| || ||| |||||| |||||| | Sbjct 66 ACCTCCAGCATCCC-TCTCGAGACACCTTCACAGGCTTACAGAACGCTCTCCTACCACTT 124 Query 195 CCACACAGGTTG----CCACAGCTTCGGCGGATAACT---TAAGCCCCGCTACATTATCG 247 ||| || || ||||||||| ||||| | ||||||| ||||| || Sbjct 125 GCACTTGCGTGCAAATCCGCAGCTTCGG----TAACTGGCTTAGCCCCGTTACATCTTCC 180 Query 248 GCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAG 307 |||| | | ||| || |||||||||||||||| ||||| || |||||||||||| ||| Sbjct 181 GCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAG 240 Query 308 CCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGG 367 ||||| ||||| ||| | || |||| || ||||||||| || || |||||| Sbjct 241 CCAACATCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTAGCCA-ATTTTAGGGA 299 Query 368 CCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 ||||||||| | |||||| ||||||||||| Sbjct 300 CCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 330 >seq132 Length=602 Score = 129 bits (142), Expect = 1e-27 Identities = 205/290 (71%), Gaps = 8/290 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 || |||||| || |||||| |||||| ||||||| |||| | | ||| | | | | Sbjct 315 CGCCTACGCTCTTCAGCCTCGGCTTAGGTCCCGACTAACCCTGAGTGGACGAGCCTTCCT 374 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| |||| | | |||| ||| | ||||| ||| | || |||||||||| || | Sbjct 375 CAGGAAACCTTAGGCATTCGGTGGATGAGATTCTCACTCATCTTTCGCTACTCATACCGG 434 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||| | |||||||| | | || ||||||| | | | || Sbjct 435 CATTCTCACTTCTAAGCGCTCCACCAGTCCTT-ACGGTCTAGCTTCAACGCCCTTAGAAC 493 Query 181 GCTCCCCTACCCA----ACCACACAGGTTG--CCACAGCTTCGGCGGATAACTTAAGCCC 234 |||| |||||| | || | | || |||||||||||| | ||| || ||||| Sbjct 494 GCTCTCCTACCACTGACATCATAGATGTCAATCCACAGCTTCGGTG-ATACGTTTAGCCC 552 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTC 284 || |||||| ||||||| || ||||| ||||||||||||||||||||||| Sbjct 553 CGGTACATTTTCGGCGCAGAGTCACTCGACCAGTGAGCTATTACGCACTC 602 >seq1245 Length=1300 Score = 118 bits (130), Expect = 2e-24 Identities = 88/103 (85%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 296 GCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTC 355 |||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||| | Sbjct 1 GCTGCTTCTAAGCCAACATCCTGGTTGTCTAAGCAACTCCACATCCTTTTCCACTTAACG 60 Query 356 ACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||| ||| ||||||||| || |||||||||||||||||| Sbjct 61 TATACTTTGGGACCTTAGCTGGTGGTCTGGGCTGTTTCCCTCT 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177542874624