Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq3935 203 8e-50
seq1923 145 2e-32
seq132 129 1e-27
seq1245 118 2e-24
>seq3935
Length=1602
Score = 203 bits (224), Expect = 8e-50
Identities = 294/412 (71%), Gaps = 21/412 (5%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||| || |||| |||| |||||| ||| ||||||| | || || | | | |
Sbjct 1158 CGACTACCCCCTTCGGGCTCGTCTTAGGGGCCGGCTCACCCTGCGCGGATTAGCCTTGCG 1099
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
| ||||||||||| |||||| | ||| || ||||| | | ||||||||||| ||
Sbjct 1098 CAGGAACCCTTGGTCTTTCGGCGAAAGGGCATCTCACCCTTTTTATCGCTACTCATGTCT 1039
Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACG 178
|||||| |||| | | ||||||||| || | ||| | ||||| | || ||
Sbjct 1038 GCATTCGCACTTCCGATACCTCCACCACCCATT-ACCAGATGGCTTCGCAGGCTTACGGA 980
Query 179 ACGCTCCCCTACCC---------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTA 229
||||||| ||||| ||| ||||| || |||||||| | | |||
Sbjct 979 ACGCTCCGCTACCGCGTGTAGTAAACTACACAC----CCTAAGCTTCGGTGCACGTCTTG 924
Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTG-----ACCAGTGAGCTATTACGCACTC 284
||||||| ||||| ||| ||| | | | |||| ||||||||||| |||||| ||
Sbjct 923 AGCCCCGTTACATCTTCGCCGCAGGAACCCTTGTTTAGACCAGTGAGCTGTTACGCTTTC 864
Query 285 TTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTT 344
||| ||||||||||||||| ||||||||||||||||||| | | | |||||| ||||
Sbjct 863 TTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCACATGCTTT 804
Query 345 CCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396
|||||| || | |||| ||| ||||||||| | || |||||||||||||
Sbjct 803 CCCACTTAGACGTGACTTGGGGACCTTAGCTGTAGGTCAGGGCTGTTTCCCT 752
>seq1923
Length=740
Score = 145 bits (160), Expect = 2e-32
Identities = 237/331 (72%), Gaps = 18/331 (5%)
Strand=Plus/Plus
Query 79 CGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCCTGCATTCTCACT-CGCATC 136
||||| |||| || |||||| | |||||||||||||| |||||| |||| | ||
Sbjct 7 CGGCGAGCGGGCTTTTCACCCGCTTTAACGCTACTCATGCCAGCATTCGCACTTCTGAT- 65
Query 137 AACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGACGCTCCCCTACC-CAA 194
| ||||| || | || | | || |||||| || ||| |||||| |||||| |
Sbjct 66 ACCTCCAGCATCCC-TCTCGAGACACCTTCACAGGCTTACAGAACGCTCTCCTACCACTT 124
Query 195 CCACACAGGTTG----CCACAGCTTCGGCGGATAACT---TAAGCCCCGCTACATTATCG 247
||| || || ||||||||| ||||| | ||||||| ||||| ||
Sbjct 125 GCACTTGCGTGCAAATCCGCAGCTTCGG----TAACTGGCTTAGCCCCGTTACATCTTCC 180
Query 248 GCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAG 307
|||| | | ||| || |||||||||||||||| ||||| || |||||||||||| |||
Sbjct 181 GCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAG 240
Query 308 CCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGG 367
||||| ||||| ||| | || |||| || ||||||||| || || ||||||
Sbjct 241 CCAACATCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTAGCCA-ATTTTAGGGA 299
Query 368 CCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
||||||||| | |||||| |||||||||||
Sbjct 300 CCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 330
>seq132
Length=602
Score = 129 bits (142), Expect = 1e-27
Identities = 205/290 (71%), Gaps = 8/290 (3%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
|| |||||| || |||||| |||||| ||||||| |||| | | ||| | | | |
Sbjct 315 CGCCTACGCTCTTCAGCCTCGGCTTAGGTCCCGACTAACCCTGAGTGGACGAGCCTTCCT 374
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120
| |||| |||| | | |||| ||| | ||||| ||| | || |||||||||| || |
Sbjct 375 CAGGAAACCTTAGGCATTCGGTGGATGAGATTCTCACTCATCTTTCGCTACTCATACCGG 434
Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180
|||||||||| | |||||||| | | || ||||||| | | | ||
Sbjct 435 CATTCTCACTTCTAAGCGCTCCACCAGTCCTT-ACGGTCTAGCTTCAACGCCCTTAGAAC 493
Query 181 GCTCCCCTACCCA----ACCACACAGGTTG--CCACAGCTTCGGCGGATAACTTAAGCCC 234
|||| |||||| | || | | || |||||||||||| | ||| || |||||
Sbjct 494 GCTCTCCTACCACTGACATCATAGATGTCAATCCACAGCTTCGGTG-ATACGTTTAGCCC 552
Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTC 284
|| |||||| ||||||| || ||||| |||||||||||||||||||||||
Sbjct 553 CGGTACATTTTCGGCGCAGAGTCACTCGACCAGTGAGCTATTACGCACTC 602
>seq1245
Length=1300
Score = 118 bits (130), Expect = 2e-24
Identities = 88/103 (85%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 296 GCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTC 355
|||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||| |
Sbjct 1 GCTGCTTCTAAGCCAACATCCTGGTTGTCTAAGCAACTCCACATCCTTTTCCACTTAACG 60
Query 356 ACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
|||| ||| ||||||||| || ||||||||||||||||||
Sbjct 61 TATACTTTGGGACCTTAGCTGGTGGTCTGGGCTGTTTCCCTCT 103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177542874624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |