Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4737 318 1e-84 seq968 306 7e-81 >seq4737 Length=1028 Score = 318 bits (352), Expect = 1e-84 Identities = 253/304 (83%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84 ||| ||||||||||||||||||| ||| |||| | ||| || ||||||||||||||| Sbjct 864 AGATCTTAACCTGCTAAATAGCCCAGCCTACTTTTGTGGGCTGCTGGCTTCTTAGAGGGA 805 Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144 ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 804 CTATCAGCTCAAGCCAATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCTCTTAGATGT 745 Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204 ||||||| |||| | |||| |||||||| |||| | ||| ||| | |||| || || Sbjct 744 TCTGGGCTGCACACATGCTATACTGACAGGGCCAGCAAGTACATTATCTTGACCAAGAGA 685 Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264 ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| Sbjct 684 TCTGGGTAATCTTGTTAAATCCTGTCATGCTGGAGATAGAGCATTGCAATTATTGCTCTT 625 Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324 |||| || ||||||||||| | | || |||||| | | ||||| || ||| ||| Sbjct 624 CAACAAGAAATGCCTAGTAGACACAAGTTATCAGCTTGTGCCAATTACATCTCTGTTCTT 565 Query 325 TGTA 328 |||| Sbjct 564 TGTA 561 >seq968 Length=3778 Score = 306 bits (338), Expect = 7e-81 Identities = 250/304 (82%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84 ||||||||| ||||||||||||| ||| | |||| | | | || |||||||||||| || Sbjct 982 AGACCTTAATCTGCTAAATAGCCTGGCTCACTTTTGTGAGCTGCTGGCTTCTTAGAGAGA 923 Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144 |||| |||||||||| ||||||||||||||||||||||| |||||||||| |||||||| Sbjct 922 CTATTGGCTCAAGCCAATGGAAGTTTGAGGCAATAACAGATCTGTGATGCTTTTAGATGT 863 Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204 ||||| || || | | | |||||||| || | || | ||| |||| |||| | | || Sbjct 862 TCTGGACCACATGTGTGTTACACTGATAGGGTCAGCAAGTATATCATCTTGACTGAGAGA 803 Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264 ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||| || Sbjct 802 TCTGGATAATCTTGTTAAATTCTGTTGTGCTGGGGATAGAGCATTGCAATTATTGCTTTT 743 Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324 ||| ||| |||| |||||| | | ||||||||| | | ||||||| | ||||| ||| Sbjct 742 CAATGAGAAATGTCTAGTAGACACAAGTCATCAGCTTGTGCTGATTACATTCCTGCTCTT 683 Query 325 TGTA 328 |||| Sbjct 682 TGTA 679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947154051328