Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq1923 513 5e-143
seq3935 309 1e-81
seq1245 239 2e-60
>seq1923
Length=740
Score = 513 bits (568), Expect = 5e-143
Identities = 421/501 (84%), Gaps = 17/501 (3%)
Strand=Plus/Minus
Query 1 TCGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 668 TCGAGTCCGAATAGGGCGATCAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTATCCA 609
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|||||||||||||||||| |||||| | ||||||||||||||| |||| ||||| ||||
Sbjct 608 TGGCCAGGATGAAGGTGCCGTAACAGGTACTGGAGGTCCGAACCGACTAGTGTTGCAAAA 549
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 548 CTAGCGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 489
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATG 239
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
Sbjct 488 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATTACCTGCGGGGGTAGAGCACTGTTTAG 429
Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAAT-GCGCATCAGTTTTA 298
||||||||||||| ||||||||||||||| |||||||||||||| |||| || ||
Sbjct 428 GCTAGGGGGTCATGGCGACTTACCAAACCTATGCAAACTCCGAATACCGCA-GAG---TA 373
Query 299 CCGC--GGGAGTGAGGGCA-TGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
| || ||||| || ||| ||||||||| ||||| | | ||||| || || || ||
Sbjct 372 CAGCTTGGGAGACAGAGCACCGGGTGCTAACGTCCGGACTCAAGAGGGAAACAACCCAGA 313
Query 356 CTATCAGCTAAGGCCCCGAAA--TGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413
| ||||||||| ||| ||| || ||||||| | |||||||| || |||||
Sbjct 312 CCGCCAGCTAAGGTCCCTAAAATTG---GCTAAGTGGGA--AACGAAGTGGGAAGGCTAA 258
Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473
|||| ||||||||||||| |||||||||| ||||||||||| |||||| ||||||||
Sbjct 257 AACAGTCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACT 199
Query 474 AGTCGAGGAGTCGGGCGTGGA 494
||||| ||| ||| |||
Sbjct 198 GATCGAGTCGTCCTGCGCGGA 178
>seq3935
Length=1602
Score = 309 bits (342), Expect = 1e-81
Identities = 366/483 (76%), Gaps = 16/483 (3%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTA---GACCCGAAACCAAGTGATCTACCC 58
|||||| ||| ||||||||| | | | | ||| ||||||||||| | |||||| |
Sbjct 413 CGAGTCTGAATAGGGCGACA-TAGTTTGAAGTATTAGACCCGAAACCCGGCGATCTAGGC 471
Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118
||| ||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||
Sbjct 472 ATGACCAGGATGAAGGTGCGGTAACACGCACTGGAGGTCCGAACCGATTAACGTTGAAAA 531
Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178
||| ||||||| |||| |||||||||||||| || ||| | |||||||||||||||
Sbjct 532 GTTACCGGATGAGTTGTGTTTAGGGGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGTTC 591
Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTT 236
|| ||||||||||| |||||||||||| | | | |||| | |||||||||||||||
Sbjct 592 TCCGCGAAAACTATTGAGGTAGTGCCTCGGATGGA-CACCCTAGGGGGTAGAGCACTG-G 649
Query 237 ATGGCT-AGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295
|||| | ||||||| | || |||||| | |||||||||||| | | |||
Sbjct 650 ATGGATGCGGGGGTC-GCGAGATCTACCAACTCTAACCAAACTCCGAATACCTAGGAGTG 708
Query 296 TTA-CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGG 354
|| ||| | || || ||| |||||||||||||||| | | ||| || | || |
Sbjct 709 ATATCCGGGAGACAGACGGC--GGGTGCTAAGGTCCGTCGTCAAAAGGGAAACAGCCCTG 766
Query 355 ACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAG 414
|| ||||||||| ||| || | || |||||| | || | || || | | ||
Sbjct 767 ACCTACAGCTAAGGTCCCCAAGTCACGTCTAAGTGGGA--AAGCATGTGGGAATCCCAAA 824
Query 415 ACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTA 474
||| | |||| |||||||| |||||||||| || |||||||| |||||||||||||||
Sbjct 825 ACAACCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAACAGCTCACTG 883
Query 475 GTC 477
|||
Sbjct 884 GTC 886
>seq1245
Length=1300
Score = 239 bits (264), Expect = 2e-60
Identities = 323/444 (73%), Gaps = 6/444 (1%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTG-GGT-GTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| ||| ||||||| || || ||| ||||||||||||||| ||||||||||||
Sbjct 441 CGAGTCTGAATAGGGCGATAGAGTATGTGGTCGTAGACCCGAAACCAGGTGATCTACCCA 382
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|| ||||| ||||| |||||||| |||||| |||||||||| | ||||||||
Sbjct 381 TGTCCAGGGTGAAGTCCAGGTAACACTGGATGGAGGCCCGAACCCACGCACGTTGAAAAG 322
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| ||||||||| ||||||||| || |||| | || | |||||||| ||||||||||||
Sbjct 321 TGCGGGGATGAGGTGTGGGTAGCGGAGAAATTCCAATCGAACTTGGAGATAGCTGGTTCT 262
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAA-GTATCACCATCGGGGGTAGAGCACTGTTAT 238
|||||||| |||||| ||||||| ||| | || || ||||||||||||||
Sbjct 261 CTCCGAAATAGCTTTAGGGCTAGCCTCAAGGTAAGAGTATTGGAGGTAGAGCACTGTTTG 202
Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTA 298
| ||||||| | || ||||| || |||||||||||||| | | || |
Sbjct 201 GACTAGGGGCCCCCATCGGGTTACCGAATTCAGACAAACTCCGAATGCCAAATACTTAT- 143
Query 299 CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTA 358
|| |||||| || | ||| |||| ||||| | ||||| || | || ||| |
Sbjct 142 CCTTGGGAGTCAGACTGCGAGTGATAAGATCCGTAGTCAAGAGGGAAACAGCCCAGACCA 83
Query 359 TCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAG 418
||||||||| ||| || | | ||||| || || || || ||||| |||||
Sbjct 82 CCAGCTAAGGTCCCAAAGTATACGTTAAGTGGAA--AAGGATGTGGAGTTGCTTAGACAA 25
Query 419 CTAGGATGTTGGCTTGGAAGCAGC 442
| ||||||||||||| ||||||||
Sbjct 24 CCAGGATGTTGGCTTAGAAGCAGC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689518037504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |