Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1052 233 4e-59 seq1245 140 6e-31 seq66 96.9 6e-18 >seq1052 Length=704 Score = 233 bits (258), Expect = 4e-59 Identities = 182/216 (84%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct 215 AGAGCATGTGGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATA 156 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| | |||||||||| |||||||||||||||||||||| | Sbjct 155 AGCTTCGGGGAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC-AC 97 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 |||| ||| || ||||| ||||| ||||| |||| | |||||| || |||||||||| Sbjct 96 CCTTAGGGGTATCGCATGATGAATTCATAGTCATGCGAGGCGAACCGGGTGAACTGAAAC 37 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGAT 216 |||| ||||||| ||||||||| |||||||||||| Sbjct 36 ATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGAT 1 >seq1245 Length=1300 Score = 140 bits (154), Expect = 6e-31 Identities = 194/262 (74%), Gaps = 16/262 (6%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59 || || || ||||||||||||||| | || |||||||||||| | || | |||| Sbjct 1108 AGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACTAACAC-CGAT 1050 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||||||| | || | |||||||||| |||||||||||||||||||||| Sbjct 1049 ATGCTTCGGGGAGCT-GTAAGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCAC 991 Query 120 C--CCTT--TGGGTCATTGCATGCT-----GAATACATAG-GTATGCAAAGCGA-ACGCG 168 || | |||| || | || | |||||||||| ||| ||| | || || Sbjct 990 TATCCGTAATGGG--ATAGTATCGTTACTTGAATACATAGAGTAACAGAAGGCAGACCCG 933 Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 | ||||||||||||||||||| | | ||||| ||||| ||| || ||||||| ||||| Sbjct 932 GGGAACTGAAACATCTAAGTACCCGGAGGAAGAGAAAGCAAACGCGATTCCCTTAGTAGC 873 Query 229 GGCGAGCGAAATGGGATGAGCC 250 ||||||||||| ||||| |||| Sbjct 872 GGCGAGCGAAACGGGATTAGCC 851 >seq66 Length=544 Score = 96.9 bits (106), Expect = 6e-18 Identities = 88/110 (80%), Gaps = 7/110 (6%) Strand=Plus/Minus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG-- 68 |||||||||||||| ||||||||||||||||||| | | |||||||||| ||| Sbjct 108 GTGGATGCCTTGGCATGTACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCGTCGGTG 49 Query 69 -GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 || |||||||| |||||| ||| ||||||||||||||||||||| Sbjct 48 AGGTGTGAGCAA----CCTTTGACCCGACGATTTCCGAATGGGGAAACCC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918355448416