Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 233 4e-59
seq1245 140 6e-31
seq66 96.9 6e-18
>seq1052
Length=704
Score = 233 bits (258), Expect = 4e-59
Identities = 182/216 (84%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| |||||||||||||||||||||||||||| ||||||||| |||| |||||||
Sbjct 215 AGAGCATGTGGTGGATGCCTTGGCGATTACAGGCGACGAAGGACGTGATAGCCTGCGATA 156
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
|||| ||||||| ||||| | |||||||||| |||||||||||||||||||||| |
Sbjct 155 AGCTTCGGGGAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCC-AC 97
Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180
|||| ||| || ||||| ||||| ||||| |||| | |||||| || ||||||||||
Sbjct 96 CCTTAGGGGTATCGCATGATGAATTCATAGTCATGCGAGGCGAACCGGGTGAACTGAAAC 37
Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGAT 216
|||| ||||||| ||||||||| ||||||||||||
Sbjct 36 ATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGAT 1
>seq1245
Length=1300
Score = 140 bits (154), Expect = 6e-31
Identities = 194/262 (74%), Gaps = 16/262 (6%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59
|| || || ||||||||||||||| | || |||||||||||| | || | ||||
Sbjct 1108 AGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACTAACAC-CGAT 1050
Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119
| ||| ||||||| | || | |||||||||| ||||||||||||||||||||||
Sbjct 1049 ATGCTTCGGGGAGCT-GTAAGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCAC 991
Query 120 C--CCTT--TGGGTCATTGCATGCT-----GAATACATAG-GTATGCAAAGCGA-ACGCG 168
|| | |||| || | || | |||||||||| ||| ||| | || ||
Sbjct 990 TATCCGTAATGGG--ATAGTATCGTTACTTGAATACATAGAGTAACAGAAGGCAGACCCG 933
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
| ||||||||||||||||||| | | ||||| ||||| ||| || ||||||| |||||
Sbjct 932 GGGAACTGAAACATCTAAGTACCCGGAGGAAGAGAAAGCAAACGCGATTCCCTTAGTAGC 873
Query 229 GGCGAGCGAAATGGGATGAGCC 250
||||||||||| ||||| ||||
Sbjct 872 GGCGAGCGAAACGGGATTAGCC 851
>seq66
Length=544
Score = 96.9 bits (106), Expect = 6e-18
Identities = 88/110 (80%), Gaps = 7/110 (6%)
Strand=Plus/Minus
Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG-- 68
|||||||||||||| ||||||||||||||||||| | | |||||||||| |||
Sbjct 108 GTGGATGCCTTGGCATGTACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCGTCGGTG 49
Query 69 -GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117
|| |||||||| |||||| ||| |||||||||||||||||||||
Sbjct 48 AGGTGTGAGCAA----CCTTTGACCCGACGATTTCCGAATGGGGAAACCC 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918355448416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |