Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq4072 280 2e-73
seq4825 172 9e-41
seq4643 77.0 5e-12
>seq4072
Length=753
Score = 280 bits (310), Expect = 2e-73
Identities = 238/284 (84%), Gaps = 12/284 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 669 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 612
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 611 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 552
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178
||||| || ||| | || |||| | ||||| ||||||||||||| |||| || | ||
Sbjct 551 GAACGCGGCGATGTTGCCCCGCACGTTGTAGTTGGATACGAATAGGCCTTCGGGTCAAGA 492
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCG----CGGGGCGCTCAGCTGGCGG 234
|||| |||||| | || || ||||||| ||||| | ||||||| ||||| |||
Sbjct 491 ACCTCAGCAGGTCAGCGAC-GGCGTCC--GGGAAGAGACTCTCGGGCGCT-AGCTGACGG 436
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||||| |||||| |||| |||||| ||||| ||||||||||
Sbjct 435 ATTGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGAC 392
>seq4825
Length=1728
Score = 172 bits (190), Expect = 9e-41
Identities = 214/284 (75%), Gaps = 12/284 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||| ||||||||| | || |||||| |||||| |||||| ||||||||||| || ||||
Sbjct 1024 GTATGAGAGGAACTGTTGA-TTCAGA-TAATTGATTTTTGTGGCTGTCTGACAAGACAGT 1081
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||| | | ||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1082 GCCACAACACTACCATCTGCCAGATTATGGCTGAACATCTCTAAGTCAGAATCCATGCTG 1141
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178
|||| ||||| | || ||||| ||||| |||||| |||||| |||| || | ||
Sbjct 1142 GAACACAGTGATGTTGCCCCACACATTGTAGTTGGATACAAATAGGTCTTCAGGTCAAGA 1201
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCG----CGGGGCGCTCAGCTGGCGG 234
|||| ||||| || | |||| ||||| | || ||| ||||| |
Sbjct 1202 ACCTCAGCAGATTAATAA-TGATGTCC--AGGAAGAGACTCTCAGGTGCT-AGCTGATGA 1257
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||||| |||||| |||| |||||| ||||| |||||| |||
Sbjct 1258 ATTGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGATGAC 1301
>seq4643
Length=364968
Score = 77.0 bits (84), Expect = 5e-12
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 152263 GTACGAGAGGAACCATTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 152206
Query 61 G 61
|
Sbjct 152205 G 152205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819161502464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |