Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq4072 280 2e-73 seq4825 172 9e-41 seq4643 77.0 5e-12 >seq4072 Length=753 Score = 280 bits (310), Expect = 2e-73 Identities = 238/284 (84%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 669 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 612 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 611 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 552 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| || ||| | || |||| | ||||| ||||||||||||| |||| || | || Sbjct 551 GAACGCGGCGATGTTGCCCCGCACGTTGTAGTTGGATACGAATAGGCCTTCGGGTCAAGA 492 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCG----CGGGGCGCTCAGCTGGCGG 234 |||| |||||| | || || ||||||| ||||| | ||||||| ||||| ||| Sbjct 491 ACCTCAGCAGGTCAGCGAC-GGCGTCC--GGGAAGAGACTCTCGGGCGCT-AGCTGACGG 436 Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| |||||| |||| |||||| ||||| |||||||||| Sbjct 435 ATTGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGAC 392 >seq4825 Length=1728 Score = 172 bits (190), Expect = 9e-41 Identities = 214/284 (75%), Gaps = 12/284 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||| | || |||||| |||||| |||||| ||||||||||| || |||| Sbjct 1024 GTATGAGAGGAACTGTTGA-TTCAGA-TAATTGATTTTTGTGGCTGTCTGACAAGACAGT 1081 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||| | | ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1082 GCCACAACACTACCATCTGCCAGATTATGGCTGAACATCTCTAAGTCAGAATCCATGCTG 1141 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 |||| ||||| | || ||||| ||||| |||||| |||||| |||| || | || Sbjct 1142 GAACACAGTGATGTTGCCCCACACATTGTAGTTGGATACAAATAGGTCTTCAGGTCAAGA 1201 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCG----CGGGGCGCTCAGCTGGCGG 234 |||| ||||| || | |||| ||||| | || ||| ||||| | Sbjct 1202 ACCTCAGCAGATTAATAA-TGATGTCC--AGGAAGAGACTCTCAGGTGCT-AGCTGATGA 1257 Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| |||||| |||| |||||| ||||| |||||| ||| Sbjct 1258 ATTGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGATGAC 1301 >seq4643 Length=364968 Score = 77.0 bits (84), Expect = 5e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 152263 GTACGAGAGGAACCATTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 152206 Query 61 G 61 | Sbjct 152205 G 152205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819161502464