Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq968 717 0.0 seq4399 544 2e-152 >seq968 Length=3778 Score = 717 bits (794), Expect = 0.0 Identities = 463/506 (92%), Gaps = 2/506 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 1793 GTACTCATTCCAATTACAAGATCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTATCT 1852 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | || | || |||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 1853 CTCCATATCAGGATTGGGTAATTTGCGCACCTGCTGCCTTCCTTGGATGTGGTAGCTGTT 1912 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||| || ||||||| |||| ||||||||||||||| |||||| ||| ||||||||| Sbjct 1913 TCTCAGACTTCCTCTCCAGAATTGAACCCTAATTCCCCATTACCCATTGCCACCATGGTA 1972 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || | Sbjct 1973 GGCCACTATCCTATCATTGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCACCAGTG 2032 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||| |||||| ||| | |||||||||||||||||||| |||||| ||||||| ||| | Sbjct 2033 CAAGACCATGCAATTTGACAAGTTATTATGAATCACCAAAGAGCCCTGAAGGGCATTGAT 2092 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 2093 TTTTTATCTAATAAATACACCCCTTCCAAAGTCAAGGTTTTTAGCATGTATTAGCTCTAG 2152 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2153 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACAATAACTGATTTAATGA 2212 Query 421 GCCATTCGCAGTTTCACTGTATAGA--TTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||| ||||||||||||| | | |||||||||||||||||||||||||||||| || Sbjct 2213 GCCATTCACAGTTTCACTGTACAAATTTTGCTTATACTTAGACATGCATGGCTTAATTTT 2272 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 2273 TGAGACAAGCATATGACTACTGGCAG 2298 >seq4399 Length=701 Score = 544 bits (602), Expect = 2e-152 Identities = 363/403 (90%), Gaps = 2/403 (0%) Strand=Plus/Minus Query 104 TGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTAC 163 || ||||||||||| |||||||| ||| |||||| ||||| |||||||||| | | |||| Sbjct 701 TGAATGTGGTAGCCATTTCTCAGACTCTCTCTCCAGAATCAAACCCTAATTTCTCATTAC 642 Query 164 CCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223 || ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 641 CCATTGCCACCATAGTAGGCCACTATCCTACCATCAAAAGTTGATAGGGCAGAAATTTGA 582 Query 224 ATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAG 283 |||||||||| || | |||| |||||| |||| |||||||||||||||| ||| ||| Sbjct 581 ATGAACCATCACCAACACAAGACCATGCAATTCAACAAGTTATTATGAATCATCAAAGAG 522 Query 284 CCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTA 343 ||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 521 CCCTGAAGGGCATTGGTTTTTTATCTAATAAATACACCCCTTCTGAAGTCAAGGTTTTTA 462 Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 461 GCATGTATTAGCTCTAGAATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAAC 402 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA--TTGCTTATACTTAGAC 461 ||||||||||||||||||||||| ||||||||| || | | |||||||||||||||| Sbjct 401 AATAACTGATTTAATGAGCCATTCACAGTTTCACCATACAAATTTTGCTTATACTTAGAC 342 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 341 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510326730496