Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq968 717 0.0
seq4399 544 2e-152
>seq968
Length=3778
Score = 717 bits (794), Expect = 0.0
Identities = 463/506 (92%), Gaps = 2/506 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1793 GTACTCATTCCAATTACAAGATCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTATCT 1852
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| || | || |||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1853 CTCCATATCAGGATTGGGTAATTTGCGCACCTGCTGCCTTCCTTGGATGTGGTAGCTGTT 1912
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||| || ||||||| |||| ||||||||||||||| |||||| ||| |||||||||
Sbjct 1913 TCTCAGACTTCCTCTCCAGAATTGAACCCTAATTCCCCATTACCCATTGCCACCATGGTA 1972
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || |
Sbjct 1973 GGCCACTATCCTATCATTGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCACCAGTG 2032
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||| |||||| ||| | |||||||||||||||||||| |||||| ||||||| ||| |
Sbjct 2033 CAAGACCATGCAATTTGACAAGTTATTATGAATCACCAAAGAGCCCTGAAGGGCATTGAT 2092
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 2093 TTTTTATCTAATAAATACACCCCTTCCAAAGTCAAGGTTTTTAGCATGTATTAGCTCTAG 2152
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2153 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACAATAACTGATTTAATGA 2212
Query 421 GCCATTCGCAGTTTCACTGTATAGA--TTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||| ||||||||||||| | | |||||||||||||||||||||||||||||| ||
Sbjct 2213 GCCATTCACAGTTTCACTGTACAAATTTTGCTTATACTTAGACATGCATGGCTTAATTTT 2272
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 2273 TGAGACAAGCATATGACTACTGGCAG 2298
>seq4399
Length=701
Score = 544 bits (602), Expect = 2e-152
Identities = 363/403 (90%), Gaps = 2/403 (0%)
Strand=Plus/Minus
Query 104 TGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTAC 163
|| ||||||||||| |||||||| ||| |||||| ||||| |||||||||| | | ||||
Sbjct 701 TGAATGTGGTAGCCATTTCTCAGACTCTCTCTCCAGAATCAAACCCTAATTTCTCATTAC 642
Query 164 CCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223
|| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 641 CCATTGCCACCATAGTAGGCCACTATCCTACCATCAAAAGTTGATAGGGCAGAAATTTGA 582
Query 224 ATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAG 283
|||||||||| || | |||| |||||| |||| |||||||||||||||| ||| |||
Sbjct 581 ATGAACCATCACCAACACAAGACCATGCAATTCAACAAGTTATTATGAATCATCAAAGAG 522
Query 284 CCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTA 343
||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 521 CCCTGAAGGGCATTGGTTTTTTATCTAATAAATACACCCCTTCTGAAGTCAAGGTTTTTA 462
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 461 GCATGTATTAGCTCTAGAATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAAC 402
Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA--TTGCTTATACTTAGAC 461
||||||||||||||||||||||| ||||||||| || | | ||||||||||||||||
Sbjct 401 AATAACTGATTTAATGAGCCATTCACAGTTTCACCATACAAATTTTGCTTATACTTAGAC 342
Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510326730496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |