Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq3711 152 1e-32 >seq3711 Length=1691 Score = 152 bits (168), Expect = 1e-32 Identities = 354/530 (67%), Gaps = 8/530 (2%) Strand=Plus/Plus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || || |||||||| ||||||||| |||| | || ||| || | | Sbjct 1163 GACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGAAC 1222 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 ||||| || ||||| ||||| || || || | || | |||||||| | || ||| Sbjct 1223 GATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTG 1282 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | | ||| | || | | | ||| ||| |||||||| || Sbjct 1283 CTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATC 1342 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 ||||| || |||||| ||| ||||||| || || ||| | ||||||| ||| |||||| Sbjct 1343 TGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCGC 1402 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAG-AT 38007 ||| | | | ||||| ||||||||||||||| | || ||||| || Sbjct 1403 AGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGT-GAAGACCAT 1461 Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067 ||| |||||| | || ||||| | | || ||||| ||||| || || || | Sbjct 1462 CAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCGGACATCCC 1521 Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCG 38124 ||||| |||| |||| || || ||| ||| |||||||| ||||| ||||| Sbjct 1522 GAAGATGGCGCTGGCGCCCTGCCA---CGCGTTCTTCCAGTTCTACGTCGCGGACGGCAA 1578 Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 | |||| ||| | | | |||||| | || | || | || ||||||| ||||| Sbjct 1579 GCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACAT 1638 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGG 38234 ||| ||||||||||| | ||||| ||| | || || || |||||| ||| Sbjct 1639 CGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGG 1688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130632474401150