Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq3006 104 7e-18 >seq3006 Length=1579 Score = 104 bits (114), Expect = 7e-18 Identities = 257/388 (66%), Gaps = 4/388 (1%) Strand=Plus/Plus Query 2553 CGAAAACGACTGGGACGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATT 2612 |||| |||||||||||| ||||| || || || || || || | || || || | Sbjct 1034 CGAAGGCGACTGGGACGGCTGGAAGCTGCTGACCGAGCGCCTGGGCAGCAAGGTGCAGCT 1093 Query 2613 GGTTGGTGACGACTTCTTCGTAACTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACA 2672 ||| || |||||| | ||||| || ||||| ||| | |||| || | | | Sbjct 1094 GGTGGGCGACGACCTGTTCGTCACCAACACCAAGATCCTCAAGGAAGGCATCGACAAGCG 1153 Query 2673 CGCTGCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGA 2732 | || ||||| ||||| ||||| | ||||| ||||| || |||| || || || | Sbjct 1154 CATCGCCAACTCGATCCTGATCAAGATCAACCAGATCGGCACGCTGACCGAGACCTTCGC 1213 Query 2733 CGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCA--CACCGTTCAGGT 2790 ||| ||||| ||||| || || ||||| || || |||| ||||| || || Sbjct 1214 CGCCATCGAGATGGCCAAGCGCGCCAACTACACGGCCGT--CATCAGCCACCGCTCGGGC 1271 Query 2791 GAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAG 2850 || || || || || ||||| || || || || | || ||||| || || || ||| Sbjct 1272 GAGACCGAGGACAGCACCATCGCCGACATCGCGGTGGGCACCAACGCCGGCCAGATCAAG 1331 Query 2851 ACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAA 2910 || || || | || | ||||| || || || |||||||| |||| || ||||| Sbjct 1332 ACCGGCTCGCTCAGCCGCAGCGACCGCATGGCCAAGTACAACCAGCTGCTGCGCATCGAG 1391 Query 2911 GACCAACTTGGTGAAGTTGCAGAATACC 2938 || | || || || || || | |||| Sbjct 1392 GAAGACCTGGGCGACGTCGCGCAGTACC 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156029411310444