Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq3711 125 1e-23 >seq3711 Length=1691 Score = 125 bits (138), Expect = 1e-23 Identities = 182/253 (72%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 196112 CACGACAAAG-CTGACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGC 196169 |||| | ||| | ||||| ||||| || ||||| | | | | ||||| ||||||| Sbjct 1150 CACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGT-TCGGCTACCAGATGC 1208 Query 196170 GCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCA 196229 | ||||| ||| | || || ||||||||||| ||||| ||||| |||| ||| |||| Sbjct 1209 GGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCA 1268 Query 196230 TCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACA 196289 |||| || || |||||||||||||| | || | | ||| ||| | ||| || Sbjct 1269 TCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGC 1328 Query 196290 ACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACG 196349 ||| || | |||||| |||| |||||| ||| ||| ||||||||||||| |||| Sbjct 1329 GCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACG 1388 Query 196350 GTAAGCAGTGGCG 196362 | ||||||||| Sbjct 1389 GCGTGCAGTGGCG 1401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771495615597720