Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq1315 118 1e-21 >seq1315 Length=3472 Score = 118 bits (130), Expect = 1e-21 Identities = 388/602 (64%), Gaps = 31/602 (5%) Strand=Plus/Plus Query 162100 AAAGTAGCACTTATTACTGGGATCACAGGGCAAGATGGATCTTACCTAGCTGAACTTCTC 162159 || || || ||| | || || | || || ||||| ||||| || ||||| ||| |||| Sbjct 1176 AAGGTTGCGCTTGTCACCGGTGTTACCGGTCAAGACGGATCATATCTAGCAGAATTTCTG 1235 Query 162160 CTTCAGAAAGGATATACAGTTCACGGTATTATCCGTCGTGCTTCTATGATTAACACCCAC 162219 || | ||||| ||| || ||||| |||| || ||||| || || |||| || || Sbjct 1236 CTGGAAAAAGGCTATGAGGTACACGGCATTAAGCGCCGTGCGTCATTGTTTAATACACAG 1295 Query 162220 AGAATTGACCATATCTTTGAC--------CGCATCA---------CT----CTCCATTAT 162258 | ||||||||||||| ||| |||| || || || |||||| Sbjct 1296 CGTATTGACCATATCTATGAAGATCCTCACGCACCATCGCCAGACCTTCGGCTTCATTAT 1355 Query 162259 GGAGACCTTACCGATGCTTTGAGTAT----CGTATCTATTATTAAAACAGTTCAACCAGA 162314 || || | |||| ||| | | | || ||| || | || || || || Sbjct 1356 GGCGATTTATCCGACTCTTCTAATTTGACCCGCATC----ATGCAGGAGGTACAGCCGGA 1411 Query 162315 TGAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGAATA 162374 || | |||||||| || ||||| |||||||| ||| ||||| ||| ||||| Sbjct 1412 CGAGGTTTATAACCTCGGTGCTCAAAGTCACGTGGCTGTTAGTTTTGAAGCGCCGGAATA 1471 Query 162375 CACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGG 162434 || || | || | | || || | | |||| ||||| | || ||| |||| Sbjct 1472 TACCGCGGATGTTGATGGGCTTGGTACGTTGCGTTTGCTGGAAGCAATTCG-CTTTTTGG 1530 Query 162435 TATGGAATCATACGTAAGAAT-CTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTC 162493 || | | | | | | ||| |||||| ||| || || ||||| || || | Sbjct 1531 GATTGGAGAAGAAGACAAAATTCTACCAGGCGTCGACGTCGGAACTTTACGGATCGGTGC 1590 Query 162494 AGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTA 162553 |||| ||||| ||| || | ||| ||| | ||||| ||||| || |||| || || | Sbjct 1591 AGGAAACACCGCAGCGCGAGAACACACCATTTTATCCCCGATCACCATATGCGGTAGCAA 1650 Query 162554 AACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTA 162613 | ||||| | | ||||| | |||||| | ||| ||||| |||| | || | | Sbjct 1651 AGCTATACGCATATTGGATGACGGTGAACTACCGAGAAGCCTATGGCATATACGCTTGCA 1710 Query 162614 GCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGA 162673 || || || || |||||||||||| |||| ||||| ||||| ||||| || ||||| | Sbjct 1711 ATGGCATCCTGTTTAATCACGAAAGCCCACGTAGAGGCGAGACATTCGTAACGCGCAAAA 1770 Query 162674 TC 162675 || Sbjct 1771 TC 1772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691417271642760